Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC135279.3-201ENST00000610945 1311 ntBASIC20.81■□□□□ 0.92
SSR2P43308 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SSR2P43308 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SSR2P43308 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSR2P43308 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSR2P43308 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSR2P43308 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.81■□□□□ 0.92
SSR2P43308 AC024257.2-201ENST00000549699 147 ntBASIC20.81■□□□□ 0.92
SSR2P43308 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.81■□□□□ 0.92
SSR2P43308 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.81■□□□□ 0.92
SSR2P43308 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSR2P43308 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSR2P43308 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSR2P43308 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSR2P43308 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSR2P43308 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSR2P43308 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSR2P43308 MIR4767-201ENST00000582827 78 ntBASIC20.8■□□□□ 0.92
SSR2P43308 AC010525.1-201ENST00000585559 441 ntBASIC20.8■□□□□ 0.92
SSR2P43308 AL031602.1-201ENST00000633169 911 ntBASIC20.8■□□□□ 0.92
SSR2P43308 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SSR2P43308 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.79■□□□□ 0.92
SSR2P43308 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SSR2P43308 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSR2P43308 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.79■□□□□ 0.92
SSR2P43308 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.79■□□□□ 0.92
SSR2P43308 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.79■□□□□ 0.92
SSR2P43308 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SSR2P43308 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SSR2P43308 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SSR2P43308 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSR2P43308 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.78■□□□□ 0.92
SSR2P43308 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR2P43308 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR2P43308 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.78■□□□□ 0.92
SSR2P43308 SLC47A1P1-202ENST00000449666 945 ntBASIC20.78■□□□□ 0.92
SSR2P43308 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SSR2P43308 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR2P43308 AC242852.2-201ENST00000615738 1807 ntBASIC20.78■□□□□ 0.92
SSR2P43308 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR2P43308 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSR2P43308 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSR2P43308 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SSR2P43308 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.77■□□□□ 0.92
SSR2P43308 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 PBX2P1-201ENST00000493219 1291 ntBASIC20.77■□□□□ 0.92
SSR2P43308 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.77■□□□□ 0.92
SSR2P43308 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.77■□□□□ 0.92
SSR2P43308 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.77■□□□□ 0.92
SSR2P43308 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.77■□□□□ 0.92
SSR2P43308 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.77■□□□□ 0.92
SSR2P43308 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR2P43308 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SSR2P43308 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR2P43308 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR2P43308 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR2P43308 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR2P43308 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR2P43308 AC080038.3-201ENST00000623346 1952 ntBASIC20.76■□□□□ 0.91
SSR2P43308 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SSR2P43308 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.76■□□□□ 0.91
SSR2P43308 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.76■□□□□ 0.91
SSR2P43308 CA15P2-201ENST00000611168 834 ntBASIC20.76■□□□□ 0.91
SSR2P43308 AC068587.7-201ENST00000641602 218 ntBASIC20.76■□□□□ 0.91
SSR2P43308 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SSR2P43308 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SSR2P43308 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR2P43308 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR2P43308 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 AC087239.1-201ENST00000622671 572 ntBASIC20.75■□□□□ 0.91
SSR2P43308 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSR2P43308 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SSR2P43308 AC137767.1-201ENST00000602918 1920 ntBASIC20.74■□□□□ 0.91
SSR2P43308 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms