Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 XRN1YGL173C 4587 nt2.48□□□□□ -2.01
TRA1P38811 YLR297WYLR297W 390 nt2.48□□□□□ -2.01
TRA1P38811 TRS85YDR108W 2097 nt2.48□□□□□ -2.01
TRA1P38811 PRP28YDR243C 1767 nt2.48□□□□□ -2.01
TRA1P38811 TPK2YPL203W 1143 nt2.48□□□□□ -2.01
TRA1P38811 TIF4631YGR162W 2859 nt2.48□□□□□ -2.01
TRA1P38811 tW(CCA)G1tW(CCA)G1 72 nt2.47□□□□□ -2.01
TRA1P38811 tW(CCA)G2tW(CCA)G2 72 nt2.47□□□□□ -2.01
TRA1P38811 tW(CCA)JtW(CCA)J 72 nt2.47□□□□□ -2.01
TRA1P38811 tW(CCA)KtW(CCA)K 72 nt2.47□□□□□ -2.01
TRA1P38811 tW(CCA)MtW(CCA)M 72 nt2.47□□□□□ -2.01
TRA1P38811 tW(CCA)PtW(CCA)P 72 nt2.47□□□□□ -2.01
TRA1P38811 YJR037WYJR037W 384 nt2.47□□□□□ -2.01
TRA1P38811 MGM101YJR144W 810 nt2.47□□□□□ -2.01
TRA1P38811 EMC6YLL014W 327 nt2.47□□□□□ -2.01
TRA1P38811 GCD1YOR260W 1737 nt2.47□□□□□ -2.01
TRA1P38811 MYO5YMR109W 3660 nt2.47□□□□□ -2.01
TRA1P38811 YPR050CYPR050C 414 nt2.47□□□□□ -2.01
TRA1P38811 DIB1YPR082C 432 nt2.46□□□□□ -2.01
TRA1P38811 NHX1YDR456W 1902 nt2.46□□□□□ -2.01
TRA1P38811 ENA2YDR039C 3276 nt2.46□□□□□ -2.02
TRA1P38811 ENA1YDR040C 3276 nt2.46□□□□□ -2.02
TRA1P38811 YMR187CYMR187C 1296 nt2.46□□□□□ -2.02
TRA1P38811 TIP20YGL145W 2106 nt2.46□□□□□ -2.02
TRA1P38811 YPK9YOR291W 4419 nt2.46□□□□□ -2.02
TRA1P38811 PFK26YIL107C 2484 nt2.46□□□□□ -2.02
TRA1P38811 YIL169CYIL169C 2988 nt2.46□□□□□ -2.02
TRA1P38811 FAP7YDL166C 594 nt2.45□□□□□ -2.02
TRA1P38811 ANS1YHR126C 480 nt2.45□□□□□ -2.02
TRA1P38811 IDP2YLR174W 1239 nt2.45□□□□□ -2.02
TRA1P38811 FRE7YOL152W 1863 nt2.45□□□□□ -2.02
TRA1P38811 VBA2YBR293W 1425 nt2.45□□□□□ -2.02
TRA1P38811 VTH1YIL173W 4650 nt2.45□□□□□ -2.02
TRA1P38811 VTH2YJL222W 4650 nt2.45□□□□□ -2.02
TRA1P38811 RPL34AYER056C-A 366 nt2.45□□□□□ -2.02
TRA1P38811 PSY1YKL076C 384 nt2.45□□□□□ -2.02
TRA1P38811 KTR7YIL085C 1554 nt2.45□□□□□ -2.02
TRA1P38811 GPI1YGR216C 1830 nt2.44□□□□□ -2.02
TRA1P38811 NEW1YPL226W 3591 nt2.44□□□□□ -2.02
TRA1P38811 FUN12YAL035W 3009 nt2.44□□□□□ -2.02
TRA1P38811 APM4YOL062C 1476 nt2.44□□□□□ -2.02
TRA1P38811 ASG7YJL170C 630 nt2.44□□□□□ -2.02
TRA1P38811 YOR277CYOR277C 309 nt2.44□□□□□ -2.02
TRA1P38811 NTO1YPR031W 2247 nt2.44□□□□□ -2.02
TRA1P38811 CDC6YJL194W 1542 nt2.44□□□□□ -2.02
TRA1P38811 JIP3YLR331C 378 nt2.44□□□□□ -2.02
TRA1P38811 APL6YGR261C 2430 nt2.44□□□□□ -2.02
TRA1P38811 MCP2YLR253W 1710 nt2.44□□□□□ -2.02
TRA1P38811 RRD2YPL152W 1077 nt2.43□□□□□ -2.02
TRA1P38811 CDC16YKL022C 2523 nt2.43□□□□□ -2.02
TRA1P38811 VPS17YOR132W 1656 nt2.43□□□□□ -2.02
TRA1P38811 YPL216WYPL216W 3309 nt2.43□□□□□ -2.02
TRA1P38811 YOR050CYOR050C 348 nt2.43□□□□□ -2.02
TRA1P38811 YPL113CYPL113C 1191 nt2.43□□□□□ -2.02
TRA1P38811 RPS11AYDR025W 471 nt2.43□□□□□ -2.02
TRA1P38811 RRP46YGR095C 672 nt2.43□□□□□ -2.02
TRA1P38811 PAM1YDR251W 2493 nt2.42□□□□□ -2.02
TRA1P38811 BET3YKR068C 582 nt2.42□□□□□ -2.02
TRA1P38811 YPL150WYPL150W 2706 nt2.42□□□□□ -2.02
TRA1P38811 NUP85YJR042W 2235 nt2.42□□□□□ -2.02
TRA1P38811 SSQ1YLR369W 1974 nt2.42□□□□□ -2.02
TRA1P38811 SUP45YBR143C 1314 nt2.42□□□□□ -2.02
TRA1P38811 YLR255CYLR255C 354 nt2.42□□□□□ -2.02
TRA1P38811 PEX32YBR168W 1242 nt2.42□□□□□ -2.02
TRA1P38811 VPS41YDR080W 2979 nt2.42□□□□□ -2.02
TRA1P38811 MNT4YNR059W 1743 nt2.42□□□□□ -2.02
TRA1P38811 GPI8YDR331W 1236 nt2.42□□□□□ -2.02
TRA1P38811 YHL005CYHL005C 393 nt2.42□□□□□ -2.02
TRA1P38811 UBA2YDR390C 1911 nt2.41□□□□□ -2.02
TRA1P38811 SUB2YDL084W 1341 nt2.41□□□□□ -2.02
TRA1P38811 HOT1YMR172W 2160 nt2.41□□□□□ -2.02
TRA1P38811 ENV9YOR246C 993 nt2.41□□□□□ -2.02
TRA1P38811 PHO87YCR037C 2772 nt2.41□□□□□ -2.02
TRA1P38811 GRC3YLL035W 1899 nt2.41□□□□□ -2.02
TRA1P38811 GPI12YMR281W 915 nt2.41□□□□□ -2.02
TRA1P38811 WRS1YOL097C 1299 nt2.41□□□□□ -2.02
TRA1P38811 VTC3YPL019C 2508 nt2.41□□□□□ -2.02
TRA1P38811 PEX18YHR160C 852 nt2.4□□□□□ -2.02
TRA1P38811 YKR033CYKR033C 426 nt2.4□□□□□ -2.02
TRA1P38811 SSN2YDR443C 4263 nt2.4□□□□□ -2.03
TRA1P38811 PTI1YGR156W 1278 nt2.4□□□□□ -2.03
TRA1P38811 PHD1YKL043W 1101 nt2.4□□□□□ -2.03
TRA1P38811 YJL132WYJL132W 2253 nt2.4□□□□□ -2.03
TRA1P38811 DHH1YDL160C 1521 nt2.4□□□□□ -2.03
TRA1P38811 URK1YNR012W 1506 nt2.4□□□□□ -2.03
TRA1P38811 MHO1YJR008W 1017 nt2.39□□□□□ -2.03
TRA1P38811 SFH1YLR321C 1281 nt2.39□□□□□ -2.03
TRA1P38811 FLO9YAL063C 3969 nt2.39□□□□□ -2.03
TRA1P38811 KAR4YCL055W 1008 nt2.39□□□□□ -2.03
TRA1P38811 FKH1YIL131C 1455 nt2.39□□□□□ -2.03
TRA1P38811 PTR2YKR093W 1806 nt2.39□□□□□ -2.03
TRA1P38811 STE11YLR362W 2154 nt2.38□□□□□ -2.03
TRA1P38811 YER134CYER134C 537 nt2.38□□□□□ -2.03
TRA1P38811 ATG27YJL178C 816 nt2.38□□□□□ -2.03
TRA1P38811 DNM1YLL001W 2274 nt2.38□□□□□ -2.03
TRA1P38811 YNL247WYNL247W 2304 nt2.38□□□□□ -2.03
TRA1P38811 YDL241WYDL241W 372 nt2.38□□□□□ -2.03
TRA1P38811 ATP7YKL016C 525 nt2.38□□□□□ -2.03
TRA1P38811 TIS11YLR136C 858 nt2.38□□□□□ -2.03
TRA1P38811 YPR108W-AYPR108W-A 213 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms