Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 SIR1YKR101W 1965 nt5.17□□□□□ -1.58
PUB1P32588 HMRA2YCR096C 360 nt5.17□□□□□ -1.58
PUB1P32588 YER010CYER010C 705 nt5.17□□□□□ -1.58 RIP-Chip
PUB1P32588 THI5YFL058W 1023 nt5.17□□□□□ -1.58
PUB1P32588 YKL023C-AYKL023C-A 228 nt5.17□□□□□ -1.58
PUB1P32588 YLR287CYLR287C 1068 nt5.17□□□□□ -1.58
PUB1P32588 RRN9YMR270C 1098 nt5.17□□□□□ -1.58
PUB1P32588 RHO2YNL090W 579 nt5.17□□□□□ -1.58
PUB1P32588 BUD8YLR353W 1812 nt5.17□□□□□ -1.58
PUB1P32588 ARP4YJL081C 1470 nt5.17□□□□□ -1.58
PUB1P32588 MMT2YPL224C 1455 nt5.17□□□□□ -1.58 RIP-Chip
PUB1P32588 RIM101YHL027W 1878 nt5.17□□□□□ -1.58
PUB1P32588 MSN4YKL062W 1893 nt5.17□□□□□ -1.58 RIP-Chip
PUB1P32588 CDC19YAL038W 1503 nt5.17□□□□□ -1.58
PUB1P32588 GSY2YLR258W 2118 nt5.17□□□□□ -1.58 RIP-Chip
PUB1P32588 YME1YPR024W 2244 nt5.16□□□□□ -1.58
PUB1P32588 15S_rRNA15S_rRNA 1649 nt5.16□□□□□ -1.58
PUB1P32588 AGE1YDR524C 1449 nt5.16□□□□□ -1.58 RIP-Chip
PUB1P32588 HXK2YGL253W 1461 nt5.16□□□□□ -1.58 RIP-Chip
PUB1P32588 TMA20YER007C-A 546 nt5.16□□□□□ -1.58
PUB1P32588 SDP1YIL113W 630 nt5.16□□□□□ -1.58
PUB1P32588 CCP1YKR066C 1086 nt5.16□□□□□ -1.58 RIP-Chip
PUB1P32588 AIM39YOL053W 1188 nt5.16□□□□□ -1.58
PUB1P32588 YOR248WYOR248W 303 nt5.16□□□□□ -1.58 RIP-Chip
PUB1P32588 UBC11YOR339C 471 nt5.16□□□□□ -1.58
PUB1P32588 SUA7YPR086W 1038 nt5.16□□□□□ -1.58
PUB1P32588 ASH1YKL185W 1767 nt5.15□□□□□ -1.58
PUB1P32588 KNH1YDL049C 807 nt5.15□□□□□ -1.59
PUB1P32588 ATO3YDR384C 828 nt5.15□□□□□ -1.59 RIP-Chip
PUB1P32588 PEX4YGR133W 552 nt5.15□□□□□ -1.59 RIP-Chip
PUB1P32588 SYN8YAL014C 768 nt5.15□□□□□ -1.59 RIP-Chip
PUB1P32588 YJR087WYJR087W 351 nt5.15□□□□□ -1.59
PUB1P32588 UBI4YLL039C 1146 nt5.15□□□□□ -1.59
PUB1P32588 SEN34YAR008W 828 nt5.15□□□□□ -1.59
PUB1P32588 TMA16YOR252W 537 nt5.15□□□□□ -1.59
PUB1P32588 PRI2YKL045W 1587 nt5.15□□□□□ -1.59
PUB1P32588 VPS70YJR126C 2436 nt5.15□□□□□ -1.59
PUB1P32588 YMR111CYMR111C 1389 nt5.15□□□□□ -1.59
PUB1P32588 LCB2YDR062W 1686 nt5.15□□□□□ -1.59
PUB1P32588 PRP31YGR091W 1485 nt5.14□□□□□ -1.59
PUB1P32588 JIP5YPR169W 1479 nt5.14□□□□□ -1.59
PUB1P32588 SIT4YDL047W 936 nt5.14□□□□□ -1.59 RIP-Chip
PUB1P32588 YER079WYER079W 633 nt5.14□□□□□ -1.59
PUB1P32588 YER087C-AYER087C-A 552 nt5.14□□□□□ -1.59
PUB1P32588 RTT105YER104W 627 nt5.14□□□□□ -1.59
PUB1P32588 HUR1YGL168W 333 nt5.14□□□□□ -1.59
PUB1P32588 RPS30AYLR287C-A 192 nt5.14□□□□□ -1.59
PUB1P32588 YML009C-AYML009C-A 327 nt5.14□□□□□ -1.59
PUB1P32588 YMR086C-AYMR086C-A 339 nt5.14□□□□□ -1.59
PUB1P32588 YBL070CYBL070C 321 nt5.14□□□□□ -1.59
PUB1P32588 YOR366WYOR366W 354 nt5.14□□□□□ -1.59
PUB1P32588 MRPS5YBR251W 924 nt5.14□□□□□ -1.59
PUB1P32588 NSE5YML023C 1671 nt5.14□□□□□ -1.59 RIP-Chip
PUB1P32588 DBP9YLR276C 1785 nt5.14□□□□□ -1.59
PUB1P32588 ATG7YHR171W 1893 nt5.13□□□□□ -1.59
PUB1P32588 ORC4YPR162C 1590 nt5.13□□□□□ -1.59
PUB1P32588 snR8snR8 190 nt5.13□□□□□ -1.59
PUB1P32588 YDR199WYDR199W 366 nt5.13□□□□□ -1.59
PUB1P32588 YER068C-AYER068C-A 432 nt5.13□□□□□ -1.59
PUB1P32588 YHR138CYHR138C 345 nt5.13□□□□□ -1.59 RIP-Chip
PUB1P32588 ASK1YKL052C 879 nt5.13□□□□□ -1.59
PUB1P32588 UBX4YMR067C 1251 nt5.13□□□□□ -1.59 RIP-Chip
PUB1P32588 HOR7YMR251W-A 180 nt5.13□□□□□ -1.59 RIP-Chip
PUB1P32588 SFM1YOR021C 642 nt5.13□□□□□ -1.59
PUB1P32588 RBL2YOR265W 321 nt5.13□□□□□ -1.59 RIP-Chip
PUB1P32588 ARR2YPR200C 393 nt5.13□□□□□ -1.59
PUB1P32588 SEC66YBR171W 621 nt5.13□□□□□ -1.59
PUB1P32588 URA7YBL039C 1740 nt5.13□□□□□ -1.59 RIP-Chip
PUB1P32588 GEX1YCL073C 1848 nt5.13□□□□□ -1.59
PUB1P32588 GEX2YKR106W 1848 nt5.13□□□□□ -1.59
PUB1P32588 YJL049WYJL049W 1353 nt5.13□□□□□ -1.59
PUB1P32588 RNT1YMR239C 1416 nt5.13□□□□□ -1.59
PUB1P32588 SAC6YDR129C 1929 nt5.13□□□□□ -1.59
PUB1P32588 GGA1YDR358W 1674 nt5.12□□□□□ -1.59
PUB1P32588 NUS1YDL193W 1128 nt5.12□□□□□ -1.59
PUB1P32588 YDR461C-AYDR461C-A 243 nt5.12□□□□□ -1.59
PUB1P32588 SPT2YER161C 1002 nt5.12□□□□□ -1.59
PUB1P32588 YGL007C-AYGL007C-A 87 nt5.12□□□□□ -1.59
PUB1P32588 YIL060WYIL060W 435 nt5.12□□□□□ -1.59
PUB1P32588 YIL068W-AYIL068W-A 384 nt5.12□□□□□ -1.59
PUB1P32588 APS3YJL024C 585 nt5.12□□□□□ -1.59
PUB1P32588 YML012C-AYML012C-A 378 nt5.12□□□□□ -1.59
PUB1P32588 ATG8YBL078C 354 nt5.12□□□□□ -1.59 RIP-Chip
PUB1P32588 BRX1YOL077C 876 nt5.12□□□□□ -1.59
PUB1P32588 OPY1YBR129C 987 nt5.12□□□□□ -1.59
PUB1P32588 BMT2YBR141C 1014 nt5.12□□□□□ -1.59
PUB1P32588 RPT1YKL145W 1404 nt5.12□□□□□ -1.59
PUB1P32588 MIC60YKR016W 1623 nt5.12□□□□□ -1.59
PUB1P32588 BOP2YLR267W 1713 nt5.11□□□□□ -1.59
PUB1P32588 RET1YOR207C 3450 nt5.11□□□□□ -1.59
PUB1P32588 YDR445CYDR445C 408 nt5.11□□□□□ -1.59
PUB1P32588 GCN4YEL009C 846 nt5.11□□□□□ -1.59 RIP-Chip
PUB1P32588 SNL1YIL016W 480 nt5.11□□□□□ -1.59
PUB1P32588 YJL197C-AYJL197C-A 282 nt5.11□□□□□ -1.59
PUB1P32588 YKL136WYKL136W 399 nt5.11□□□□□ -1.59
PUB1P32588 TFS1YLR178C 660 nt5.11□□□□□ -1.59 RIP-Chip
PUB1P32588 YPT7YML001W 627 nt5.11□□□□□ -1.59
PUB1P32588 YNL109WYNL109W 546 nt5.11□□□□□ -1.59
PUB1P32588 ATG5YPL149W 885 nt5.11□□□□□ -1.59
PUB1P32588 YPR098CYPR098C 486 nt5.11□□□□□ -1.59 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms