Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YPL168WYPL168W 1293 nt4.62□□□□□ -1.67
MSH1P25846 VPS69YPR087W 321 nt4.62□□□□□ -1.67
MSH1P25846 PBN1YCL052C 1251 nt4.62□□□□□ -1.67
MSH1P25846 PUT2YHR037W 1728 nt4.62□□□□□ -1.67
MSH1P25846 MIS1YBR084W 2928 nt4.62□□□□□ -1.67
MSH1P25846 CTR86YCR054C 1692 nt4.61□□□□□ -1.67
MSH1P25846 PIB1YDR313C 861 nt4.61□□□□□ -1.67
MSH1P25846 ARC19YKL013C 516 nt4.61□□□□□ -1.67
MSH1P25846 YLR365WYLR365W 333 nt4.61□□□□□ -1.67
MSH1P25846 RRN9YMR270C 1098 nt4.61□□□□□ -1.67
MSH1P25846 IBD2YNL164C 1056 nt4.61□□□□□ -1.67
MSH1P25846 KTR6YPL053C 1341 nt4.61□□□□□ -1.67
MSH1P25846 MDM34YGL219C 1380 nt4.61□□□□□ -1.67
MSH1P25846 ATM1YMR301C 2073 nt4.61□□□□□ -1.67
MSH1P25846 GLO3YER122C 1482 nt4.61□□□□□ -1.67
MSH1P25846 MEK1YOR351C 1494 nt4.61□□□□□ -1.67
MSH1P25846 SPS2YDR522C 1509 nt4.61□□□□□ -1.67
MSH1P25846 SWI3YJL176C 2478 nt4.61□□□□□ -1.67
MSH1P25846 CDC14YFR028C 1656 nt4.61□□□□□ -1.67
MSH1P25846 CPR4YCR069W 957 nt4.6□□□□□ -1.67
MSH1P25846 HSP42YDR171W 1128 nt4.6□□□□□ -1.67
MSH1P25846 TOS8YGL096W 831 nt4.6□□□□□ -1.67
MSH1P25846 LOH1YJL038C 660 nt4.6□□□□□ -1.67
MSH1P25846 RAD27YKL113C 1149 nt4.6□□□□□ -1.67
MSH1P25846 SEC72YLR292C 582 nt4.6□□□□□ -1.67
MSH1P25846 YNL226WYNL226W 411 nt4.6□□□□□ -1.67
MSH1P25846 YBR013CYBR013C 390 nt4.6□□□□□ -1.67
MSH1P25846 snR37snR37 386 nt4.6□□□□□ -1.67
MSH1P25846 ALG6YOR002W 1635 nt4.6□□□□□ -1.67
MSH1P25846 HAP4YKL109W 1665 nt4.6□□□□□ -1.67
MSH1P25846 GIP4YAL031C 2283 nt4.6□□□□□ -1.67
MSH1P25846 NHX1YDR456W 1902 nt4.59□□□□□ -1.67
MSH1P25846 PCL7YIL050W 858 nt4.59□□□□□ -1.67
MSH1P25846 ECM22YLR228C 2445 nt4.59□□□□□ -1.67
MSH1P25846 MCM1YMR043W 861 nt4.59□□□□□ -1.67
MSH1P25846 AGA1YNR044W 2178 nt4.59□□□□□ -1.67
MSH1P25846 MNN1YER001W 2289 nt4.58□□□□□ -1.68
MSH1P25846 SNF2YOR290C 5112 nt4.58□□□□□ -1.68
MSH1P25846 YFL040WYFL040W 1623 nt4.58□□□□□ -1.68
MSH1P25846 TYW3YGL050W 822 nt4.58□□□□□ -1.68
MSH1P25846 PIR3YKL163W 978 nt4.58□□□□□ -1.68
MSH1P25846 GSP1YLR293C 660 nt4.58□□□□□ -1.68
MSH1P25846 RCL1YOL010W 1104 nt4.58□□□□□ -1.68
MSH1P25846 TAF3YPL011C 1062 nt4.58□□□□□ -1.68
MSH1P25846 APA1YCL050C 966 nt4.58□□□□□ -1.68
MSH1P25846 SAT4YCR008W 1812 nt4.58□□□□□ -1.68
MSH1P25846 CLG1YGL215W 1359 nt4.57□□□□□ -1.68
MSH1P25846 YFR032C-BYFR032C-B 264 nt4.57□□□□□ -1.68
MSH1P25846 RPP0YLR340W 939 nt4.57□□□□□ -1.68
MSH1P25846 PLP2YOR281C 861 nt4.57□□□□□ -1.68
MSH1P25846 BTS1YPL069C 1008 nt4.57□□□□□ -1.68
MSH1P25846 ATG5YPL149W 885 nt4.57□□□□□ -1.68
MSH1P25846 YPR074W-AYPR074W-A 171 nt4.57□□□□□ -1.68
MSH1P25846 ECM8YBR076W 1065 nt4.57□□□□□ -1.68
MSH1P25846 YBR292CYBR292C 372 nt4.57□□□□□ -1.68
MSH1P25846 TAF12YDR145W 1620 nt4.57□□□□□ -1.68
MSH1P25846 MAL12YGR292W 1755 nt4.56□□□□□ -1.68
MSH1P25846 MAL32YBR299W 1755 nt4.56□□□□□ -1.68
MSH1P25846 HIM1YDR317W 1245 nt4.56□□□□□ -1.68
MSH1P25846 YOS1YER074W-A 258 nt4.56□□□□□ -1.68
MSH1P25846 YGL177WYGL177W 348 nt4.56□□□□□ -1.68
MSH1P25846 CAB2YIL083C 1098 nt4.56□□□□□ -1.68
MSH1P25846 FYV6YNL133C 522 nt4.56□□□□□ -1.68
MSH1P25846 RER1YCL001W 567 nt4.56□□□□□ -1.68
MSH1P25846 MIC60YKR016W 1623 nt4.56□□□□□ -1.68
MSH1P25846 GSM1YJL103C 1857 nt4.56□□□□□ -1.68
MSH1P25846 URC2YDR520C 2319 nt4.55□□□□□ -1.68
MSH1P25846 VAC17YCL063W 1272 nt4.55□□□□□ -1.68
MSH1P25846 RPL35BYDL136W 363 nt4.55□□□□□ -1.68
MSH1P25846 RPC11YDR045C 333 nt4.55□□□□□ -1.68
MSH1P25846 DCV1YFR012W 609 nt4.55□□□□□ -1.68
MSH1P25846 GTF1YGR102C 552 nt4.55□□□□□ -1.68
MSH1P25846 YGR270C-AYGR270C-A 219 nt4.55□□□□□ -1.68
MSH1P25846 YIR021W-AYIR021W-A 213 nt4.55□□□□□ -1.68
MSH1P25846 YKL162CYKL162C 1209 nt4.55□□□□□ -1.68
MSH1P25846 YAL064WYAL064W 285 nt4.55□□□□□ -1.68
MSH1P25846 RIF2YLR453C 1188 nt4.55□□□□□ -1.68
MSH1P25846 IMP2YMR035W 534 nt4.55□□□□□ -1.68
MSH1P25846 OXR1YPL196W 822 nt4.55□□□□□ -1.68
MSH1P25846 ICS2YBR157C 768 nt4.55□□□□□ -1.68
MSH1P25846 OPT2YPR194C 2634 nt4.55□□□□□ -1.68
MSH1P25846 tQ(UUG)CtQ(UUG)C 72 nt4.54□□□□□ -1.68
MSH1P25846 tQ(UUG)D1tQ(UUG)D1 72 nt4.54□□□□□ -1.68
MSH1P25846 tQ(UUG)D2tQ(UUG)D2 72 nt4.54□□□□□ -1.68
MSH1P25846 tQ(UUG)D3tQ(UUG)D3 72 nt4.54□□□□□ -1.68
MSH1P25846 tQ(UUG)E1tQ(UUG)E1 72 nt4.54□□□□□ -1.68
MSH1P25846 tQ(UUG)HtQ(UUG)H 72 nt4.54□□□□□ -1.68
MSH1P25846 tQ(UUG)LtQ(UUG)L 72 nt4.54□□□□□ -1.68
MSH1P25846 tS(AGA)D3tS(AGA)D3 83 nt4.54□□□□□ -1.68
MSH1P25846 CUP1-1YHR053C 186 nt4.54□□□□□ -1.68
MSH1P25846 CUP1-2YHR055C 186 nt4.54□□□□□ -1.68
MSH1P25846 CCS1YMR038C 750 nt4.54□□□□□ -1.68
MSH1P25846 SAP30YMR263W 606 nt4.54□□□□□ -1.68
MSH1P25846 SUI1YNL244C 327 nt4.54□□□□□ -1.68
MSH1P25846 TMC1YOR052C 453 nt4.54□□□□□ -1.68
MSH1P25846 RRP7YCL031C 894 nt4.54□□□□□ -1.68
MSH1P25846 RTS1YOR014W 2274 nt4.53□□□□□ -1.68
MSH1P25846 YMR221CYMR221C 1515 nt4.53□□□□□ -1.68
MSH1P25846 ENT5YDR153C 1236 nt4.53□□□□□ -1.68
MSH1P25846 ERV29YGR284C 933 nt4.53□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms