Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL353803.4-201ENST00000565882 1934 ntBASIC20.35■□□□□ 0.85
CHMP24386 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CHMP24386 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP24386 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP24386 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP24386 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CHMP24386 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHMP24386 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP24386 AC096631.2-201ENST00000436136 790 ntBASIC20.34■□□□□ 0.85
CHMP24386 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.34■□□□□ 0.85
CHMP24386 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 AC092053.2-201ENST00000640557 1818 ntBASIC20.34■□□□□ 0.85
CHMP24386 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP24386 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP24386 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP24386 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHMP24386 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP24386 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP24386 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP24386 MIR638-201ENST00000385237 100 ntBASIC20.33■□□□□ 0.85
CHMP24386 AC133561.4-201ENST00000566112 224 ntBASIC20.33■□□□□ 0.85
CHMP24386 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.33■□□□□ 0.85
CHMP24386 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP24386 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.33■□□□□ 0.84
CHMP24386 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHMP24386 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP24386 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHMP24386 C11orf96-202ENST00000528572 1834 ntBASIC20.32■□□□□ 0.84
CHMP24386 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHMP24386 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP24386 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
CHMP24386 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.32■□□□□ 0.84
CHMP24386 AC110285.6-201ENST00000617652 491 ntBASIC20.32■□□□□ 0.84
CHMP24386 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP24386 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP24386 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CHMP24386 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP24386 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP24386 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP24386 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP24386 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP24386 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP24386 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP24386 AC099791.2-201ENST00000605725 427 ntBASIC20.31■□□□□ 0.84
CHMP24386 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP24386 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP24386 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 AL137060.1-201ENST00000618151 2648 ntBASIC20.3■□□□□ 0.84
CHMP24386 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHMP24386 UNC93B3-201ENST00000308076 687 ntBASIC20.3■□□□□ 0.84
CHMP24386 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHMP24386 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP24386 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CHMP24386 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CHMP24386 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 AC080038.3-201ENST00000623346 1952 ntBASIC20.29■□□□□ 0.84
CHMP24386 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHMP24386 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 SYT6-210ENST00000641643 1587 ntBASIC20.29■□□□□ 0.84
CHMP24386 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP24386 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHMP24386 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP24386 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP24386 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP24386 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP24386 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHMP24386 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP24386 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP24386 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP24386 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.28■□□□□ 0.84
CHMP24386 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP24386 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP24386 AC106739.1-201ENST00000617035 715 ntBASIC20.28■□□□□ 0.84
CHMP24386 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP24386 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP24386 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms