Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFAIP3P21580 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFAIP3P21580 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFAIP3P21580 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFAIP3P21580 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TNFAIP3P21580 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFAIP3P21580 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.36■■□□□ 1.33
TNFAIP3P21580 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.36■■□□□ 1.33
TNFAIP3P21580 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFAIP3P21580 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.36■■□□□ 1.33
TNFAIP3P21580 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFAIP3P21580 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.36■■□□□ 1.33
TNFAIP3P21580 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TNFAIP3P21580 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.35■■□□□ 1.33
TNFAIP3P21580 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.35■■□□□ 1.33
TNFAIP3P21580 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.35■■□□□ 1.33
TNFAIP3P21580 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TNFAIP3P21580 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFAIP3P21580 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.34■■□□□ 1.33
TNFAIP3P21580 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TNFAIP3P21580 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFAIP3P21580 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFAIP3P21580 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.34■■□□□ 1.33
TNFAIP3P21580 MIR3621-201ENST00000580529 85 ntBASIC23.34■■□□□ 1.33
TNFAIP3P21580 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.34■■□□□ 1.33
TNFAIP3P21580 CA15P2-201ENST00000611168 834 ntBASIC23.34■■□□□ 1.33
TNFAIP3P21580 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFAIP3P21580 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.33■■□□□ 1.33
TNFAIP3P21580 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TNFAIP3P21580 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFAIP3P21580 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TNFAIP3P21580 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.33■■□□□ 1.33
TNFAIP3P21580 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFAIP3P21580 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.33■■□□□ 1.33
TNFAIP3P21580 AC099791.2-201ENST00000605725 427 ntBASIC23.33■■□□□ 1.33
TNFAIP3P21580 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFAIP3P21580 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TNFAIP3P21580 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TNFAIP3P21580 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TNFAIP3P21580 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.32■■□□□ 1.32
TNFAIP3P21580 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 AC006455.2-201ENST00000429931 906 ntBASIC23.32■■□□□ 1.32
TNFAIP3P21580 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
TNFAIP3P21580 pRNA.6-201ENST00000610482 90 ntBASIC23.32■■□□□ 1.32
TNFAIP3P21580 pRNA.5-201ENST00000612139 90 ntBASIC23.32■■□□□ 1.32
TNFAIP3P21580 pRNA.11-201ENST00000618423 90 ntBASIC23.32■■□□□ 1.32
TNFAIP3P21580 pRNA.13-201ENST00000619112 90 ntBASIC23.32■■□□□ 1.32
TNFAIP3P21580 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.32■■□□□ 1.32
TNFAIP3P21580 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFAIP3P21580 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
TNFAIP3P21580 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TNFAIP3P21580 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.31■■□□□ 1.32
TNFAIP3P21580 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.31■■□□□ 1.32
TNFAIP3P21580 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFAIP3P21580 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 AC133637.1-201ENST00000624115 1537 ntBASIC23.3■■□□□ 1.32
TNFAIP3P21580 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFAIP3P21580 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFAIP3P21580 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFAIP3P21580 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TNFAIP3P21580 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TNFAIP3P21580 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TNFAIP3P21580 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFAIP3P21580 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms