Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPN3P20807 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CAPN3P20807 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CAPN3P20807 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN3P20807 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN3P20807 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPN3P20807 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPN3P20807 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN3P20807 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CAPN3P20807 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN3P20807 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CAPN3P20807 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CAPN3P20807 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.96■□□□□ 0.95
CAPN3P20807 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CAPN3P20807 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CAPN3P20807 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 FP325331.1-202ENST00000623531 1380 ntBASIC20.96■□□□□ 0.95
CAPN3P20807 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN3P20807 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN3P20807 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.95■□□□□ 0.94
CAPN3P20807 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.95■□□□□ 0.94
CAPN3P20807 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.95■□□□□ 0.94
CAPN3P20807 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.95■□□□□ 0.94
CAPN3P20807 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CAPN3P20807 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.95■□□□□ 0.94
CAPN3P20807 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN3P20807 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN3P20807 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.95■□□□□ 0.94
CAPN3P20807 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN3P20807 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.95■□□□□ 0.94
CAPN3P20807 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.95■□□□□ 0.94
CAPN3P20807 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN3P20807 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN3P20807 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN3P20807 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.94■□□□□ 0.94
CAPN3P20807 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN3P20807 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN3P20807 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CAPN3P20807 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.94■□□□□ 0.94
CAPN3P20807 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN3P20807 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN3P20807 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN3P20807 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN3P20807 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN3P20807 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN3P20807 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.93■□□□□ 0.94
CAPN3P20807 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.93■□□□□ 0.94
CAPN3P20807 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CAPN3P20807 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN3P20807 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.92■□□□□ 0.94
CAPN3P20807 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN3P20807 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN3P20807 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CAPN3P20807 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.92■□□□□ 0.94
CAPN3P20807 AC137630.3-201ENST00000607245 391 ntBASIC20.92■□□□□ 0.94
CAPN3P20807 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CAPN3P20807 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.92■□□□□ 0.94
CAPN3P20807 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN3P20807 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.92■□□□□ 0.94
CAPN3P20807 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CAPN3P20807 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN3P20807 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN3P20807 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN3P20807 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CAPN3P20807 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CAPN3P20807 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN3P20807 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 AC005703.6-201ENST00000623265 1329 ntBASIC20.91■□□□□ 0.94
CAPN3P20807 AC009086.3-201ENST00000623486 1008 ntBASIC20.91■□□□□ 0.94
CAPN3P20807 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.91■□□□□ 0.94
CAPN3P20807 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN3P20807 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.9■□□□□ 0.94
CAPN3P20807 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN3P20807 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms