Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HIST1H1DP16402 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1DP16402 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1DP16402 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.49■□□□□ 0.55
HIST1H1DP16402 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H1DP16402 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 AC103834.1-201ENST00000520383 144 ntBASIC18.48■□□□□ 0.55
HIST1H1DP16402 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 AC103724.3-201ENST00000564481 992 ntBASIC18.48■□□□□ 0.55
HIST1H1DP16402 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HIST1H1DP16402 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1DP16402 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.47■□□□□ 0.55
HIST1H1DP16402 AC004687.1-201ENST00000579003 1625 ntBASIC18.47■□□□□ 0.55
HIST1H1DP16402 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.47■□□□□ 0.55
HIST1H1DP16402 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H1DP16402 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1DP16402 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HIST1H1DP16402 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.46■□□□□ 0.55
HIST1H1DP16402 YBX1P4-201ENST00000392794 808 ntBASIC18.46■□□□□ 0.55
HIST1H1DP16402 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HIST1H1DP16402 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H1DP16402 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1DP16402 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HIST1H1DP16402 AC005229.4-201ENST00000610085 2198 ntBASIC18.45■□□□□ 0.54
HIST1H1DP16402 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
HIST1H1DP16402 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H1DP16402 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.45■□□□□ 0.54
HIST1H1DP16402 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1DP16402 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H1DP16402 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.44■□□□□ 0.54
HIST1H1DP16402 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms