Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
THRAP10827 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.8■■□□□ 1.08
THRAP10827 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.8■■□□□ 1.08
THRAP10827 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
THRAP10827 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
THRAP10827 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
THRAP10827 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.79■■□□□ 1.08
THRAP10827 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
THRAP10827 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
THRAP10827 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
THRAP10827 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 AC007375.3-201ENST00000600936 2314 ntBASIC21.79■■□□□ 1.08
THRAP10827 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
THRAP10827 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
THRAP10827 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.79■■□□□ 1.08
THRAP10827 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
THRAP10827 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
THRAP10827 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.78■■□□□ 1.08
THRAP10827 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.78■■□□□ 1.08
THRAP10827 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THRAP10827 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.78■■□□□ 1.08
THRAP10827 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
THRAP10827 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.77■■□□□ 1.08
THRAP10827 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.77■■□□□ 1.08
THRAP10827 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
THRAP10827 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.77■■□□□ 1.08
THRAP10827 AC027682.1-201ENST00000562846 899 ntBASIC21.77■■□□□ 1.08
THRAP10827 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THRAP10827 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.77■■□□□ 1.07
THRAP10827 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
THRAP10827 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 RASA4CP-201ENST00000424092 1398 ntBASIC21.76■■□□□ 1.07
THRAP10827 ALDH1A3-203ENST00000557963 1670 ntBASIC21.76■■□□□ 1.07
THRAP10827 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 AC026271.2-201ENST00000428091 497 ntBASIC21.76■■□□□ 1.07
THRAP10827 AC006455.2-201ENST00000429931 906 ntBASIC21.76■■□□□ 1.07
THRAP10827 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.76■■□□□ 1.07
THRAP10827 AC136469.2-201ENST00000623944 1028 ntBASIC21.76■■□□□ 1.07
THRAP10827 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THRAP10827 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.76■■□□□ 1.07
THRAP10827 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THRAP10827 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.75■■□□□ 1.07
THRAP10827 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THRAP10827 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.75■■□□□ 1.07
THRAP10827 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THRAP10827 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.75■■□□□ 1.07
THRAP10827 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THRAP10827 CA15P2-201ENST00000611168 834 ntBASIC21.75■■□□□ 1.07
THRAP10827 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.75■■□□□ 1.07
THRAP10827 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.75■■□□□ 1.07
THRAP10827 AC009086.3-201ENST00000623486 1008 ntBASIC21.75■■□□□ 1.07
THRAP10827 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THRAP10827 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THRAP10827 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
THRAP10827 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
THRAP10827 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.74■■□□□ 1.07
THRAP10827 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.74■■□□□ 1.07
THRAP10827 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.74■■□□□ 1.07
THRAP10827 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.74■■□□□ 1.07
THRAP10827 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
THRAP10827 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms