Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RARAP10276 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RARAP10276 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RARAP10276 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.93■■□□□ 1.26
RARAP10276 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RARAP10276 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.93■■□□□ 1.26
RARAP10276 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.92■■□□□ 1.26
RARAP10276 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.92■■□□□ 1.26
RARAP10276 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.92■■□□□ 1.26
RARAP10276 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.92■■□□□ 1.26
RARAP10276 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.92■■□□□ 1.26
RARAP10276 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RARAP10276 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
RARAP10276 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RARAP10276 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RARAP10276 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
RARAP10276 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RARAP10276 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RARAP10276 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.91■■□□□ 1.26
RARAP10276 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.91■■□□□ 1.26
RARAP10276 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.91■■□□□ 1.26
RARAP10276 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.91■■□□□ 1.26
RARAP10276 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RARAP10276 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.91■■□□□ 1.26
RARAP10276 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RARAP10276 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RARAP10276 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RARAP10276 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RARAP10276 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
RARAP10276 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.9■■□□□ 1.26
RARAP10276 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.9■■□□□ 1.26
RARAP10276 MIR4466-201ENST00000606121 54 ntBASIC22.9■■□□□ 1.26
RARAP10276 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RARAP10276 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RARAP10276 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RARAP10276 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RARAP10276 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.9■■□□□ 1.26
RARAP10276 LINC01960-201ENST00000563759 1884 ntBASIC22.9■■□□□ 1.26
RARAP10276 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.89■■□□□ 1.26
RARAP10276 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RARAP10276 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RARAP10276 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RARAP10276 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.89■■□□□ 1.25
RARAP10276 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RARAP10276 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RARAP10276 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RARAP10276 SRD5A1P1-201ENST00000442297 786 ntBASIC22.89■■□□□ 1.25
RARAP10276 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RARAP10276 pRNA.6-201ENST00000610482 90 ntBASIC22.89■■□□□ 1.25
RARAP10276 pRNA.5-201ENST00000612139 90 ntBASIC22.89■■□□□ 1.25
RARAP10276 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.89■■□□□ 1.25
RARAP10276 pRNA.11-201ENST00000618423 90 ntBASIC22.89■■□□□ 1.25
RARAP10276 pRNA.13-201ENST00000619112 90 ntBASIC22.89■■□□□ 1.25
RARAP10276 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RARAP10276 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.88■■□□□ 1.25
RARAP10276 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
RARAP10276 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.88■■□□□ 1.25
RARAP10276 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.88■■□□□ 1.25
RARAP10276 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.88■■□□□ 1.25
RARAP10276 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.88■■□□□ 1.25
RARAP10276 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RARAP10276 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RARAP10276 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
RARAP10276 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RARAP10276 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.87■■□□□ 1.25
RARAP10276 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RARAP10276 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RARAP10276 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.87■■□□□ 1.25
RARAP10276 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RARAP10276 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
RARAP10276 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RARAP10276 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RARAP10276 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.87■■□□□ 1.25
RARAP10276 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.87■■□□□ 1.25
RARAP10276 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.86■■□□□ 1.25
RARAP10276 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 FBXW4P1-201ENST00000426721 2239 ntBASIC22.86■■□□□ 1.25
RARAP10276 AC133637.1-201ENST00000624115 1537 ntBASIC22.86■■□□□ 1.25
RARAP10276 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RARAP10276 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.85■■□□□ 1.25
RARAP10276 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RARAP10276 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.85■■□□□ 1.25
RARAP10276 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RARAP10276 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.85■■□□□ 1.25
RARAP10276 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
RARAP10276 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.85■■□□□ 1.25
RARAP10276 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RARAP10276 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms