Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMIM18P0DKX4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20■□□□□ 0.79
SMIM18P0DKX4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SMIM18P0DKX4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SMIM18P0DKX4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SMIM18P0DKX4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20■□□□□ 0.79
SMIM18P0DKX4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM18P0DKX4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 AC131274.2-201ENST00000580697 1507 ntBASIC19.98■□□□□ 0.79
SMIM18P0DKX4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM18P0DKX4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 AC044849.2-201ENST00000606596 710 ntBASIC19.97■□□□□ 0.79
SMIM18P0DKX4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 AC144652.1-201ENST00000609974 1624 ntBASIC19.97■□□□□ 0.79
SMIM18P0DKX4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.97■□□□□ 0.79
SMIM18P0DKX4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM18P0DKX4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 AP006261.1-201ENST00000584783 668 ntBASIC19.95■□□□□ 0.78
SMIM18P0DKX4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM18P0DKX4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM18P0DKX4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms