Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 ERJ5YFR041C 888 nt3.17□□□□□ -1.9
RPL40AP0CH08 YKL033W-AYKL033W-A 711 nt3.17□□□□□ -1.9
RPL40AP0CH08 EXO5YBR163W 1758 nt3.17□□□□□ -1.9
RPL40AP0CH08 ORC1YML065W 2745 nt3.16□□□□□ -1.9
RPL40AP0CH08 RDH54YBR073W 2877 nt3.16□□□□□ -1.9
RPL40AP0CH08 FCF1YDR339C 570 nt3.16□□□□□ -1.9
RPL40AP0CH08 CDC8YJR057W 651 nt3.16□□□□□ -1.9
RPL40AP0CH08 ORM2YLR350W 651 nt3.16□□□□□ -1.9
RPL40AP0CH08 RIM9YMR063W 720 nt3.16□□□□□ -1.9
RPL40AP0CH08 MCK1YNL307C 1128 nt3.16□□□□□ -1.9
RPL40AP0CH08 OM14YBR230C 405 nt3.16□□□□□ -1.9
RPL40AP0CH08 YOL019WYOL019W 1656 nt3.16□□□□□ -1.9
RPL40AP0CH08 RNT1YMR239C 1416 nt3.16□□□□□ -1.9
RPL40AP0CH08 ATG18YFR021W 1503 nt3.15□□□□□ -1.9
RPL40AP0CH08 CDC6YJL194W 1542 nt3.15□□□□□ -1.9
RPL40AP0CH08 MSD1YPL104W 1977 nt3.15□□□□□ -1.91
RPL40AP0CH08 PRP11YDL043C 801 nt3.15□□□□□ -1.91
RPL40AP0CH08 SNF11YDR073W 510 nt3.15□□□□□ -1.91
RPL40AP0CH08 YFL065CYFL065C 309 nt3.15□□□□□ -1.91
RPL40AP0CH08 CDC26YFR036W 375 nt3.15□□□□□ -1.91
RPL40AP0CH08 YJL175WYJL175W 513 nt3.15□□□□□ -1.91
RPL40AP0CH08 MAK16YAL025C 921 nt3.15□□□□□ -1.91
RPL40AP0CH08 RRP36YOR287C 903 nt3.15□□□□□ -1.91
RPL40AP0CH08 DER1YBR201W 636 nt3.15□□□□□ -1.91
RPL40AP0CH08 TRS120YDR407C 3870 nt3.15□□□□□ -1.91
RPL40AP0CH08 KIP3YGL216W 2418 nt3.14□□□□□ -1.91
RPL40AP0CH08 NSP1YJL041W 2472 nt3.14□□□□□ -1.91
RPL40AP0CH08 GPI14YJR013W 1212 nt3.14□□□□□ -1.91
RPL40AP0CH08 YJR037WYJR037W 384 nt3.14□□□□□ -1.91
RPL40AP0CH08 RUF5-1RUF5-1 710 nt3.14□□□□□ -1.91
RPL40AP0CH08 RUF5-2RUF5-2 710 nt3.14□□□□□ -1.91
RPL40AP0CH08 SYF1YDR416W 2580 nt3.14□□□□□ -1.91
RPL40AP0CH08 NGL3YML118W 1518 nt3.14□□□□□ -1.91
RPL40AP0CH08 PUT2YHR037W 1728 nt3.13□□□□□ -1.91
RPL40AP0CH08 SSE2YBR169C 2082 nt3.13□□□□□ -1.91
RPL40AP0CH08 TED1YIL039W 1422 nt3.13□□□□□ -1.91
RPL40AP0CH08 SPO16YHR153C 597 nt3.13□□□□□ -1.91
RPL40AP0CH08 RIM11YMR139W 1113 nt3.13□□□□□ -1.91
RPL40AP0CH08 NCE103YNL036W 666 nt3.13□□□□□ -1.91
RPL40AP0CH08 WRS1YOL097C 1299 nt3.13□□□□□ -1.91
RPL40AP0CH08 YPR108W-AYPR108W-A 213 nt3.13□□□□□ -1.91
RPL40AP0CH08 IME4YGL192W 1803 nt3.13□□□□□ -1.91
RPL40AP0CH08 SMC3YJL074C 3693 nt3.13□□□□□ -1.91
RPL40AP0CH08 POL31YJR006W 1464 nt3.13□□□□□ -1.91
RPL40AP0CH08 BCH1YMR237W 2175 nt3.12□□□□□ -1.91
RPL40AP0CH08 GZF3YJL110C 1656 nt3.12□□□□□ -1.91
RPL40AP0CH08 CFD1YIL003W 882 nt3.12□□□□□ -1.91
RPL40AP0CH08 AIM25YJR100C 984 nt3.12□□□□□ -1.91
RPL40AP0CH08 PAU23YLR037C 375 nt3.12□□□□□ -1.91
RPL40AP0CH08 YMR082CYMR082C 357 nt3.12□□□□□ -1.91
RPL40AP0CH08 NOP13YNL175C 1212 nt3.12□□□□□ -1.91
RPL40AP0CH08 RPA190YOR341W 4995 nt3.12□□□□□ -1.91
RPL40AP0CH08 MUP3YHL036W 1641 nt3.11□□□□□ -1.91
RPL40AP0CH08 UBX5YDR330W 1503 nt3.11□□□□□ -1.91
RPL40AP0CH08 snR70snR70 164 nt3.11□□□□□ -1.91
RPL40AP0CH08 FAP7YDL166C 594 nt3.11□□□□□ -1.91
RPL40AP0CH08 RAI1YGL246C 1164 nt3.11□□□□□ -1.91
RPL40AP0CH08 YGR079WYGR079W 1113 nt3.11□□□□□ -1.91
RPL40AP0CH08 COX2Q0250 756 nt3.11□□□□□ -1.91
RPL40AP0CH08 YKL169CYKL169C 384 nt3.11□□□□□ -1.91
RPL40AP0CH08 FMP41YNL168C 780 nt3.11□□□□□ -1.91
RPL40AP0CH08 RPL36BYPL249C-A 303 nt3.11□□□□□ -1.91
RPL40AP0CH08 YBR137WYBR137W 540 nt3.11□□□□□ -1.91
RPL40AP0CH08 RPS9BYBR189W 588 nt3.11□□□□□ -1.91
RPL40AP0CH08 DPB2YPR175W 2070 nt3.1□□□□□ -1.91
RPL40AP0CH08 MAF1YDR005C 1188 nt3.1□□□□□ -1.91
RPL40AP0CH08 MRPS35YGR165W 1038 nt3.1□□□□□ -1.91
RPL40AP0CH08 YIL028WYIL028W 399 nt3.1□□□□□ -1.91
RPL40AP0CH08 LAC1YKL008C 1257 nt3.1□□□□□ -1.91
RPL40AP0CH08 YOR338WYOR338W 1092 nt3.1□□□□□ -1.91
RPL40AP0CH08 TPK2YPL203W 1143 nt3.1□□□□□ -1.91
RPL40AP0CH08 BCK2YER167W 2556 nt3.1□□□□□ -1.91
RPL40AP0CH08 TAF12YDR145W 1620 nt3.1□□□□□ -1.91
RPL40AP0CH08 CNM67YNL225C 1746 nt3.1□□□□□ -1.91
RPL40AP0CH08 UBP1YDL122W 2430 nt3.1□□□□□ -1.91
RPL40AP0CH08 OSH2YDL019C 3852 nt3.1□□□□□ -1.91
RPL40AP0CH08 TEL1YBL088C 8364 nt3.09□□□□□ -1.91
RPL40AP0CH08 KTR7YIL085C 1554 nt3.09□□□□□ -1.91
RPL40AP0CH08 TLG1YDR468C 675 nt3.09□□□□□ -1.91
RPL40AP0CH08 ERG28YER044C 447 nt3.09□□□□□ -1.91
RPL40AP0CH08 RAD33YML011C 534 nt3.09□□□□□ -1.91
RPL40AP0CH08 MOH1YBL049W 417 nt3.09□□□□□ -1.91
RPL40AP0CH08 NIP7YPL211W 546 nt3.09□□□□□ -1.91
RPL40AP0CH08 YJR030CYJR030C 2238 nt3.09□□□□□ -1.91
RPL40AP0CH08 PMT4YJR143C 2289 nt3.09□□□□□ -1.92
RPL40AP0CH08 GPI1YGR216C 1830 nt3.09□□□□□ -1.92
RPL40AP0CH08 BMS1YPL217C 3552 nt3.08□□□□□ -1.92
RPL40AP0CH08 DHR2YKL078W 2208 nt3.08□□□□□ -1.92
RPL40AP0CH08 TSR1YDL060W 2367 nt3.08□□□□□ -1.92
RPL40AP0CH08 GLN4YOR168W 2430 nt3.08□□□□□ -1.92
RPL40AP0CH08 SWP82YFL049W 1872 nt3.08□□□□□ -1.92
RPL40AP0CH08 RPS8BYER102W 603 nt3.08□□□□□ -1.92
RPL40AP0CH08 COG1YGL223C 1254 nt3.08□□□□□ -1.92
RPL40AP0CH08 MRP13YGR084C 1020 nt3.08□□□□□ -1.92
RPL40AP0CH08 RPS8AYBL072C 603 nt3.08□□□□□ -1.92
RPL40AP0CH08 PRP22YER013W 3438 nt3.08□□□□□ -1.92
RPL40AP0CH08 LDB17YDL146W 1476 nt3.08□□□□□ -1.92
RPL40AP0CH08 RPN3YER021W 1572 nt3.08□□□□□ -1.92
RPL40AP0CH08 MDN1YLR106C 14733 nt3.07□□□□□ -1.92
RPL40AP0CH08 YJR020WYJR020W 333 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms