Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 GFA1YKL104C 2154 nt4.5□□□□□ -1.69
TY2B-LR1P0C2J3 YOR283WYOR283W 693 nt4.5□□□□□ -1.69
TY2B-LR1P0C2J3 YFL040WYFL040W 1623 nt4.49□□□□□ -1.69
TY2B-LR1P0C2J3 DCV1YFR012W 609 nt4.49□□□□□ -1.69
TY2B-LR1P0C2J3 KTR7YIL085C 1554 nt4.49□□□□□ -1.69
TY2B-LR1P0C2J3 TRE1YPL176C 2352 nt4.49□□□□□ -1.69
TY2B-LR1P0C2J3 SEC9YGR009C 1956 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 SAC1YKL212W 1872 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 FRE7YOL152W 1863 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 YDR186CYDR186C 2634 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 PMS1YNL082W 2622 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 FZF1YGL254W 900 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 YGR079WYGR079W 1113 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 ADD37YMR184W 597 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 ATG3YNR007C 933 nt4.48□□□□□ -1.69
TY2B-LR1P0C2J3 CIT1YNR001C 1440 nt4.47□□□□□ -1.69
TY2B-LR1P0C2J3 CHS2YBR038W 2892 nt4.47□□□□□ -1.69
TY2B-LR1P0C2J3 PEF1YGR058W 1008 nt4.47□□□□□ -1.69
TY2B-LR1P0C2J3 TOM40YMR203W 1164 nt4.47□□□□□ -1.69
TY2B-LR1P0C2J3 CUZ1YNL155W 825 nt4.46□□□□□ -1.7
TY2B-LR1P0C2J3 SME1YOR159C 285 nt4.46□□□□□ -1.7
TY2B-LR1P0C2J3 HEF3YNL014W 3135 nt4.45□□□□□ -1.7
TY2B-LR1P0C2J3 ENA5YDR038C 3276 nt4.45□□□□□ -1.7
TY2B-LR1P0C2J3 ESL2YKR096W 3588 nt4.45□□□□□ -1.7
TY2B-LR1P0C2J3 ATP5YDR298C 639 nt4.45□□□□□ -1.7
TY2B-LR1P0C2J3 YMR294W-AYMR294W-A 360 nt4.45□□□□□ -1.7
TY2B-LR1P0C2J3 YPR050CYPR050C 414 nt4.45□□□□□ -1.7
TY2B-LR1P0C2J3 CIN8YEL061C 3003 nt4.44□□□□□ -1.7
TY2B-LR1P0C2J3 ARO10YDR380W 1908 nt4.44□□□□□ -1.7
TY2B-LR1P0C2J3 snR70snR70 164 nt4.44□□□□□ -1.7
TY2B-LR1P0C2J3 SPO16YHR153C 597 nt4.44□□□□□ -1.7
TY2B-LR1P0C2J3 YMR315WYMR315W 1050 nt4.44□□□□□ -1.7
TY2B-LR1P0C2J3 RAX2YLR084C 3663 nt4.44□□□□□ -1.7
TY2B-LR1P0C2J3 TSC11YER093C 4293 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 RPA135YPR010C 3612 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 YPR003CYPR003C 2265 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 KRS1YDR037W 1776 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 YPL168WYPL168W 1293 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 SLD2YKL108W 1362 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 CIT3YPR001W 1461 nt4.43□□□□□ -1.7
TY2B-LR1P0C2J3 ICY1YMR195W 384 nt4.42□□□□□ -1.7
TY2B-LR1P0C2J3 PSF1YDR013W 627 nt4.42□□□□□ -1.7
TY2B-LR1P0C2J3 BUD5YCR038C 1929 nt4.42□□□□□ -1.7
TY2B-LR1P0C2J3 VPS17YOR132W 1656 nt4.41□□□□□ -1.7
TY2B-LR1P0C2J3 NTH1YDR001C 2256 nt4.41□□□□□ -1.7
TY2B-LR1P0C2J3 RDL2YOR286W 450 nt4.41□□□□□ -1.7
TY2B-LR1P0C2J3 YBR298C-AYBR298C-A 222 nt4.41□□□□□ -1.7
TY2B-LR1P0C2J3 ATG27YJL178C 816 nt4.4□□□□□ -1.7
TY2B-LR1P0C2J3 FYV5YCL058C 459 nt4.4□□□□□ -1.7
TY2B-LR1P0C2J3 DBP3YGL078C 1572 nt4.4□□□□□ -1.7
TY2B-LR1P0C2J3 GPI1YGR216C 1830 nt4.4□□□□□ -1.71
TY2B-LR1P0C2J3 SSA2YLL024C 1920 nt4.4□□□□□ -1.71
TY2B-LR1P0C2J3 OM14YBR230C 405 nt4.4□□□□□ -1.71
TY2B-LR1P0C2J3 PSK2YOL045W 3306 nt4.39□□□□□ -1.71
TY2B-LR1P0C2J3 CAJ1YER048C 1176 nt4.39□□□□□ -1.71
TY2B-LR1P0C2J3 YKR070WYKR070W 1059 nt4.39□□□□□ -1.71
TY2B-LR1P0C2J3 TRS85YDR108W 2097 nt4.39□□□□□ -1.71
TY2B-LR1P0C2J3 SPP41YDR464W 4308 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 MIT1YEL007W 2001 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 RPP1AYDL081C 321 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 FAP7YDL166C 594 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 YGR122WYGR122W 1209 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 YHL005CYHL005C 393 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 SAW1YAL027W 786 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 TDA5YLR426W 981 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 RPL23AYBL087C 414 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 PTP3YER075C 2787 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 MSE1YOL033W 1611 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 YLR278CYLR278C 4026 nt4.38□□□□□ -1.71
TY2B-LR1P0C2J3 SOH1YGL127C 384 nt4.37□□□□□ -1.71
TY2B-LR1P0C2J3 KTI11YBL071W-A 249 nt4.37□□□□□ -1.71
TY2B-LR1P0C2J3 UBC1YDR177W 648 nt4.37□□□□□ -1.71
TY2B-LR1P0C2J3 JIP3YLR331C 378 nt4.37□□□□□ -1.71
TY2B-LR1P0C2J3 PEX1YKL197C 3132 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 ATG18YFR021W 1503 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 JJJ1YNL227C 1773 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 CDC16YKL022C 2523 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 UBP1YDL122W 2430 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 YOL019WYOL019W 1656 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 PRR2YDL214C 2100 nt4.36□□□□□ -1.71
TY2B-LR1P0C2J3 CLB3YDL155W 1284 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 YFL051CYFL051C 483 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 YMR085WYMR085W 1299 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 MNN1YER001W 2289 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 MCP2YLR253W 1710 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 PRP22YER013W 3438 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 RPS13YDR064W 456 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 TOS8YGL096W 831 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 SIZ1YDR409W 2715 nt4.35□□□□□ -1.71
TY2B-LR1P0C2J3 TUL1YKL034W 2277 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 EMC1YCL045C 2283 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 YHR078WYHR078W 1659 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 SNF3YDL194W 2655 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 STP4YDL048C 1473 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 APM4YOL062C 1476 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 NEW1YPL226W 3591 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 YDR537CYDR537C 606 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 RAD33YML011C 534 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 KAR4YCL055W 1008 nt4.34□□□□□ -1.71
TY2B-LR1P0C2J3 YCL023CYCL023C 348 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms