Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.41■■□□□ 1.02
CAPN1P07384 AC092171.4-201ENST00000609130 632 ntBASIC21.41■■□□□ 1.02
CAPN1P07384 AL136967.2-201ENST00000623968 743 ntBASIC21.41■■□□□ 1.02
CAPN1P07384 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CAPN1P07384 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.4■■□□□ 1.02
CAPN1P07384 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
CAPN1P07384 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.4■■□□□ 1.02
CAPN1P07384 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.4■■□□□ 1.02
CAPN1P07384 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.4■■□□□ 1.02
CAPN1P07384 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.4■■□□□ 1.02
CAPN1P07384 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.4■■□□□ 1.02
CAPN1P07384 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN1P07384 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN1P07384 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN1P07384 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN1P07384 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN1P07384 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.39■■□□□ 1.01
CAPN1P07384 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN1P07384 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.39■■□□□ 1.01
CAPN1P07384 DUX4L4-201ENST00000566884 1269 ntBASIC21.39■■□□□ 1.01
CAPN1P07384 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.39■■□□□ 1.01
CAPN1P07384 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.39■■□□□ 1.01
CAPN1P07384 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN1P07384 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN1P07384 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN1P07384 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CAPN1P07384 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 MIR4767-201ENST00000582827 78 ntBASIC21.38■■□□□ 1.01
CAPN1P07384 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CAPN1P07384 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CAPN1P07384 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CAPN1P07384 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN1P07384 AC080038.3-201ENST00000623346 1952 ntBASIC21.37■■□□□ 1.01
CAPN1P07384 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CAPN1P07384 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 MIR939-201ENST00000401314 82 ntBASIC21.37■■□□□ 1.01
CAPN1P07384 AP001330.3-201ENST00000520123 633 ntBASIC21.37■■□□□ 1.01
CAPN1P07384 AF213884.3-201ENST00000563833 479 ntBASIC21.37■■□□□ 1.01
CAPN1P07384 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN1P07384 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 AC139530.1-201ENST00000575312 1977 ntBASIC21.37■■□□□ 1.01
CAPN1P07384 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CAPN1P07384 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CAPN1P07384 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN1P07384 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CAPN1P07384 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN1P07384 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN1P07384 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN1P07384 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.36■■□□□ 1.01
CAPN1P07384 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN1P07384 AC009086.3-201ENST00000623486 1008 ntBASIC21.36■■□□□ 1.01
CAPN1P07384 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CAPN1P07384 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
CAPN1P07384 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN1P07384 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CAPN1P07384 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN1P07384 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN1P07384 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 CLDN5-201ENST00000403084 2357 ntBASIC21.35■■□□□ 1.01
CAPN1P07384 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN1P07384 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.35■■□□□ 1.01
CAPN1P07384 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.35■■□□□ 1.01
CAPN1P07384 AL138724.1-201ENST00000606771 1088 ntBASIC21.35■■□□□ 1.01
CAPN1P07384 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CAPN1P07384 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN1P07384 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms