Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 AC026271.2-201ENST00000428091 497 ntBASIC22.34■■□□□ 1.17
MT-CO1P00395 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
MT-CO1P00395 AL031602.1-201ENST00000633169 911 ntBASIC22.34■■□□□ 1.17
MT-CO1P00395 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
MT-CO1P00395 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
MT-CO1P00395 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.34■■□□□ 1.17
MT-CO1P00395 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
MT-CO1P00395 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO1P00395 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO1P00395 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO1P00395 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO1P00395 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.33■■□□□ 1.17
MT-CO1P00395 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.33■■□□□ 1.17
MT-CO1P00395 RARRES2P6-201ENST00000567333 442 ntBASIC22.33■■□□□ 1.17
MT-CO1P00395 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.33■■□□□ 1.17
MT-CO1P00395 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
MT-CO1P00395 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO1P00395 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MT-CO1P00395 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
MT-CO1P00395 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.33■■□□□ 1.16
MT-CO1P00395 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.32■■□□□ 1.16
MT-CO1P00395 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO1P00395 MIR572-201ENST00000384983 95 ntBASIC22.32■■□□□ 1.16
MT-CO1P00395 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO1P00395 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
MT-CO1P00395 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.32■■□□□ 1.16
MT-CO1P00395 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.32■■□□□ 1.16
MT-CO1P00395 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO1P00395 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
MT-CO1P00395 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MT-CO1P00395 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
MT-CO1P00395 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.32■■□□□ 1.16
MT-CO1P00395 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.31■■□□□ 1.16
MT-CO1P00395 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.31■■□□□ 1.16
MT-CO1P00395 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
MT-CO1P00395 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-CO1P00395 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.31■■□□□ 1.16
MT-CO1P00395 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.3■■□□□ 1.16
MT-CO1P00395 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO1P00395 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO1P00395 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO1P00395 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.3■■□□□ 1.16
MT-CO1P00395 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO1P00395 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.3■■□□□ 1.16
MT-CO1P00395 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO1P00395 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.3■■□□□ 1.16
MT-CO1P00395 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.3■■□□□ 1.16
MT-CO1P00395 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-CO1P00395 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.3■■□□□ 1.16
MT-CO1P00395 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-CO1P00395 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-CO1P00395 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-CO1P00395 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
MT-CO1P00395 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO1P00395 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO1P00395 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO1P00395 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-CO1P00395 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-CO1P00395 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.29■■□□□ 1.16
MT-CO1P00395 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.29■■□□□ 1.16
MT-CO1P00395 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.29■■□□□ 1.16
MT-CO1P00395 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
MT-CO1P00395 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO1P00395 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO1P00395 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-CO1P00395 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MT-CO1P00395 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO1P00395 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO1P00395 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.28■■□□□ 1.16
MT-CO1P00395 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO1P00395 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.28■■□□□ 1.16
MT-CO1P00395 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-CO1P00395 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.28■■□□□ 1.16
MT-CO1P00395 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MT-CO1P00395 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.28■■□□□ 1.16
MT-CO1P00395 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.28■■□□□ 1.16
MT-CO1P00395 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO1P00395 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-CO1P00395 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
MT-CO1P00395 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MT-CO1P00395 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MT-CO1P00395 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-CO1P00395 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
MT-CO1P00395 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.27■■□□□ 1.16
MT-CO1P00395 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-CO1P00395 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.27■■□□□ 1.16
MT-CO1P00395 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO1P00395 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO1P00395 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms