Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN1O95832 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN1O95832 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN1O95832 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 AP003733.4-201ENST00000623785 1697 ntBASIC19.46■□□□□ 0.71
CLDN1O95832 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLDN1O95832 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN1O95832 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN1O95832 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CLDN1O95832 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 AC069152.1-201ENST00000438030 544 ntBASIC19.45■□□□□ 0.7
CLDN1O95832 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN1O95832 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN1O95832 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN1O95832 AC087239.1-201ENST00000622671 572 ntBASIC19.45■□□□□ 0.7
CLDN1O95832 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN1O95832 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLDN1O95832 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CLDN1O95832 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.44■□□□□ 0.7
CLDN1O95832 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.44■□□□□ 0.7
CLDN1O95832 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN1O95832 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN1O95832 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN1O95832 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CLDN1O95832 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN1O95832 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN1O95832 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.43■□□□□ 0.7
CLDN1O95832 MFSD11-216ENST00000590393 1141 ntBASIC19.43■□□□□ 0.7
CLDN1O95832 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN1O95832 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN1O95832 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN1O95832 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN1O95832 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN1O95832 ALDH1A3-203ENST00000557963 1670 ntBASIC19.43■□□□□ 0.7
CLDN1O95832 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN1O95832 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN1O95832 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN1O95832 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN1O95832 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN1O95832 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN1O95832 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN1O95832 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN1O95832 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN1O95832 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN1O95832 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN1O95832 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN1O95832 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN1O95832 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN1O95832 BX005040.4-201ENST00000637145 1518 ntBASIC19.41■□□□□ 0.7
CLDN1O95832 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN1O95832 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CLDN1O95832 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN1O95832 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.4■□□□□ 0.7
CLDN1O95832 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN1O95832 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN1O95832 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN1O95832 AL161729.1-201ENST00000604104 1402 ntBASIC19.4■□□□□ 0.7
CLDN1O95832 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms