Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.62■■□□□ 1.53
GGPS1O95749 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.62■■□□□ 1.53
GGPS1O95749 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.62■■□□□ 1.53
GGPS1O95749 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 SMUG1P1-201ENST00000590640 811 ntBASIC24.62■■□□□ 1.53
GGPS1O95749 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.62■■□□□ 1.53
GGPS1O95749 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
GGPS1O95749 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.61■■□□□ 1.53
GGPS1O95749 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.61■■□□□ 1.53
GGPS1O95749 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
GGPS1O95749 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.61■■□□□ 1.53
GGPS1O95749 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.61■■□□□ 1.53
GGPS1O95749 BX005040.4-201ENST00000637145 1518 ntBASIC24.61■■□□□ 1.53
GGPS1O95749 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GGPS1O95749 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
GGPS1O95749 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
GGPS1O95749 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.6■■□□□ 1.53
GGPS1O95749 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.6■■□□□ 1.53
GGPS1O95749 OXCT2P1-201ENST00000447263 1535 ntBASIC24.6■■□□□ 1.53
GGPS1O95749 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
GGPS1O95749 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
GGPS1O95749 DUSP8P3-201ENST00000399571 1760 ntBASIC24.59■■□□□ 1.53
GGPS1O95749 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
GGPS1O95749 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
GGPS1O95749 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
GGPS1O95749 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
GGPS1O95749 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.59■■□□□ 1.53
GGPS1O95749 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
GGPS1O95749 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
GGPS1O95749 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
GGPS1O95749 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
GGPS1O95749 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
GGPS1O95749 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.58■■□□□ 1.53
GGPS1O95749 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.58■■□□□ 1.53
GGPS1O95749 RARRES2P11-201ENST00000635158 484 ntBASIC24.58■■□□□ 1.53
GGPS1O95749 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.58■■□□□ 1.53
GGPS1O95749 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
GGPS1O95749 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
GGPS1O95749 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
GGPS1O95749 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
GGPS1O95749 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
GGPS1O95749 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.57■■□□□ 1.52
GGPS1O95749 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
GGPS1O95749 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GGPS1O95749 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.57■■□□□ 1.52
GGPS1O95749 KRT18P61-201ENST00000585825 1298 ntBASIC24.57■■□□□ 1.52
GGPS1O95749 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.57■■□□□ 1.52
GGPS1O95749 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.57■■□□□ 1.52
GGPS1O95749 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.57■■□□□ 1.52
GGPS1O95749 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.57■■□□□ 1.52
GGPS1O95749 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
GGPS1O95749 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GGPS1O95749 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.57■■□□□ 1.52
GGPS1O95749 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
GGPS1O95749 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
GGPS1O95749 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
GGPS1O95749 AC004911.1-201ENST00000416316 871 ntBASIC24.56■■□□□ 1.52
GGPS1O95749 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.56■■□□□ 1.52
GGPS1O95749 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.56■■□□□ 1.52
GGPS1O95749 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
GGPS1O95749 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
GGPS1O95749 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
GGPS1O95749 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.56■■□□□ 1.52
GGPS1O95749 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
GGPS1O95749 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.55■■□□□ 1.52
GGPS1O95749 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
GGPS1O95749 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.55■■□□□ 1.52
GGPS1O95749 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.55■■□□□ 1.52
GGPS1O95749 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
GGPS1O95749 AC090192.1-201ENST00000517740 490 ntBASIC24.55■■□□□ 1.52
GGPS1O95749 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.55■■□□□ 1.52
GGPS1O95749 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.55■■□□□ 1.52
GGPS1O95749 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.55■■□□□ 1.52
GGPS1O95749 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
GGPS1O95749 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
GGPS1O95749 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.55■■□□□ 1.52
GGPS1O95749 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
GGPS1O95749 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
GGPS1O95749 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
GGPS1O95749 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.54■■□□□ 1.52
GGPS1O95749 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
GGPS1O95749 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
GGPS1O95749 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
GGPS1O95749 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.54■■□□□ 1.52
GGPS1O95749 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
GGPS1O95749 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms