Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE3O75131 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE3O75131 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE3O75131 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE3O75131 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE3O75131 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPNE3O75131 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.87■□□□□ 0.93
CPNE3O75131 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.87■□□□□ 0.93
CPNE3O75131 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L2-201ENST00000561772 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L6-201ENST00000626483 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L1-201ENST00000627662 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L8-201ENST00000629013 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L3-201ENST00000630187 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L7-201ENST00000630678 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 DUX4L5-201ENST00000630834 1275 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 AC068587.7-201ENST00000641602 218 ntBASIC20.87■□□□□ 0.93
CPNE3O75131 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE3O75131 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CPNE3O75131 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE3O75131 LINC02228-203ENST00000641970 1355 ntBASIC20.86■□□□□ 0.93
CPNE3O75131 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE3O75131 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CPNE3O75131 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE3O75131 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE3O75131 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CPNE3O75131 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.86■□□□□ 0.93
CPNE3O75131 KRT18P5-201ENST00000436075 1291 ntBASIC20.86■□□□□ 0.93
CPNE3O75131 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.86■□□□□ 0.93
CPNE3O75131 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE3O75131 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE3O75131 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.86■□□□□ 0.93
CPNE3O75131 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE3O75131 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE3O75131 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE3O75131 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE3O75131 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.86■□□□□ 0.93
CPNE3O75131 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE3O75131 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.85■□□□□ 0.93
CPNE3O75131 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.85■□□□□ 0.93
CPNE3O75131 CCDC92B-201ENST00000575506 885 ntBASIC20.85■□□□□ 0.93
CPNE3O75131 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE3O75131 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CPNE3O75131 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE3O75131 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE3O75131 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CPNE3O75131 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE3O75131 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE3O75131 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE3O75131 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE3O75131 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.84■□□□□ 0.93
CPNE3O75131 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE3O75131 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE3O75131 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE3O75131 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPNE3O75131 AC087239.1-201ENST00000622671 572 ntBASIC20.84■□□□□ 0.93
CPNE3O75131 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
CPNE3O75131 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CPNE3O75131 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE3O75131 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE3O75131 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPNE3O75131 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPNE3O75131 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.83■□□□□ 0.93
CPNE3O75131 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.83■□□□□ 0.93
CPNE3O75131 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CPNE3O75131 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.83■□□□□ 0.93
CPNE3O75131 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPNE3O75131 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CPNE3O75131 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.83■□□□□ 0.92
CPNE3O75131 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPNE3O75131 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
CPNE3O75131 KRT18P14-201ENST00000534205 1250 ntBASIC20.82■□□□□ 0.92
CPNE3O75131 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.82■□□□□ 0.92
CPNE3O75131 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE3O75131 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
CPNE3O75131 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms