Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC105233.4-201ENST00000642045 216 ntBASIC19.72■□□□□ 0.75
ZIC3O60481 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC3O60481 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC3O60481 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZIC3O60481 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC3O60481 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.71■□□□□ 0.75
ZIC3O60481 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.71■□□□□ 0.75
ZIC3O60481 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.71■□□□□ 0.75
ZIC3O60481 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.71■□□□□ 0.75
ZIC3O60481 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC3O60481 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.71■□□□□ 0.75
ZIC3O60481 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC3O60481 AL354811.1-201ENST00000610286 706 ntBASIC19.71■□□□□ 0.75
ZIC3O60481 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.71■□□□□ 0.75
ZIC3O60481 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC3O60481 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZIC3O60481 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC3O60481 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC3O60481 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZIC3O60481 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZIC3O60481 C1orf229-201ENST00000623686 2258 ntBASIC19.71■□□□□ 0.75
ZIC3O60481 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.7■□□□□ 0.74
ZIC3O60481 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.7■□□□□ 0.74
ZIC3O60481 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 AC012414.1-201ENST00000556676 535 ntBASIC19.7■□□□□ 0.74
ZIC3O60481 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.7■□□□□ 0.74
ZIC3O60481 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC3O60481 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC3O60481 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC3O60481 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC3O60481 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC3O60481 AC026271.2-201ENST00000428091 497 ntBASIC19.69■□□□□ 0.74
ZIC3O60481 SMUG1P1-201ENST00000590640 811 ntBASIC19.69■□□□□ 0.74
ZIC3O60481 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ZIC3O60481 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC3O60481 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC3O60481 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC3O60481 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
ZIC3O60481 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.68■□□□□ 0.74
ZIC3O60481 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
ZIC3O60481 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC3O60481 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.68■□□□□ 0.74
ZIC3O60481 AC079089.2-201ENST00000531211 1277 ntBASIC19.68■□□□□ 0.74
ZIC3O60481 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.68■□□□□ 0.74
ZIC3O60481 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.68■□□□□ 0.74
ZIC3O60481 MIR6084-201ENST00000622012 110 ntBASIC19.68■□□□□ 0.74
ZIC3O60481 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZIC3O60481 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC3O60481 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC3O60481 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ZIC3O60481 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ZIC3O60481 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZIC3O60481 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC3O60481 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.67■□□□□ 0.74
ZIC3O60481 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZIC3O60481 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 RARRES2P6-201ENST00000567333 442 ntBASIC19.67■□□□□ 0.74
ZIC3O60481 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.67■□□□□ 0.74
ZIC3O60481 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.67■□□□□ 0.74
ZIC3O60481 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.67■□□□□ 0.74
ZIC3O60481 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZIC3O60481 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ZIC3O60481 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.67■□□□□ 0.74
ZIC3O60481 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC3O60481 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZIC3O60481 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZIC3O60481 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.66■□□□□ 0.74
ZIC3O60481 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 AC097381.1-201ENST00000429019 1296 ntBASIC19.66■□□□□ 0.74
ZIC3O60481 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.66■□□□□ 0.74
ZIC3O60481 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.66■□□□□ 0.74
ZIC3O60481 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC3O60481 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZIC3O60481 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC3O60481 AC137767.1-201ENST00000602918 1920 ntBASIC19.65■□□□□ 0.74
ZIC3O60481 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ZIC3O60481 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC3O60481 AC027612.3-201ENST00000413684 1047 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms