Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.66■□□□□ 0.9
URB1O60287 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.66■□□□□ 0.9
URB1O60287 KRT18P29-201ENST00000397031 1267 ntBASIC20.66■□□□□ 0.9
URB1O60287 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.66■□□□□ 0.9
URB1O60287 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.66■□□□□ 0.9
URB1O60287 SLC7A5P1-201ENST00000568957 537 ntBASIC20.66■□□□□ 0.9
URB1O60287 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.66■□□□□ 0.9
URB1O60287 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
URB1O60287 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
URB1O60287 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
URB1O60287 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
URB1O60287 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
URB1O60287 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
URB1O60287 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
URB1O60287 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
URB1O60287 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.64■□□□□ 0.89
URB1O60287 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
URB1O60287 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
URB1O60287 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.64■□□□□ 0.89
URB1O60287 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
URB1O60287 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.64■□□□□ 0.89
URB1O60287 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.64■□□□□ 0.89
URB1O60287 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
URB1O60287 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
URB1O60287 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
URB1O60287 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.63■□□□□ 0.89
URB1O60287 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.63■□□□□ 0.89
URB1O60287 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.63■□□□□ 0.89
URB1O60287 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.63■□□□□ 0.89
URB1O60287 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
URB1O60287 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.63■□□□□ 0.89
URB1O60287 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
URB1O60287 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.63■□□□□ 0.89
URB1O60287 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.63■□□□□ 0.89
URB1O60287 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
URB1O60287 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.63■□□□□ 0.89
URB1O60287 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
URB1O60287 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
URB1O60287 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.62■□□□□ 0.89
URB1O60287 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.62■□□□□ 0.89
URB1O60287 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
URB1O60287 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.62■□□□□ 0.89
URB1O60287 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
URB1O60287 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
URB1O60287 AC104187.1-201ENST00000607510 612 ntBASIC20.61■□□□□ 0.89
URB1O60287 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
URB1O60287 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
URB1O60287 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
URB1O60287 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
URB1O60287 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.6■□□□□ 0.89
URB1O60287 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.6■□□□□ 0.89
URB1O60287 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.6■□□□□ 0.89
URB1O60287 AC133552.2-202ENST00000575694 574 ntBASIC20.6■□□□□ 0.89
URB1O60287 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.6■□□□□ 0.89
URB1O60287 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
URB1O60287 LINC01529-204ENST00000636474 1715 ntBASIC20.6■□□□□ 0.89
URB1O60287 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
URB1O60287 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
URB1O60287 GCSHP5-201ENST00000443090 522 ntBASIC20.59■□□□□ 0.89
URB1O60287 AC098590.1-201ENST00000468126 897 ntBASIC20.59■□□□□ 0.89
URB1O60287 SMUG1P1-201ENST00000590640 811 ntBASIC20.59■□□□□ 0.89
URB1O60287 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
URB1O60287 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
URB1O60287 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.58■□□□□ 0.89
URB1O60287 AC142381.4-202ENST00000563973 229 ntBASIC20.58■□□□□ 0.89
URB1O60287 AC105036.2-201ENST00000569468 176 ntBASIC20.58■□□□□ 0.89
URB1O60287 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
URB1O60287 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
URB1O60287 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.58■□□□□ 0.88
URB1O60287 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
URB1O60287 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
URB1O60287 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.58■□□□□ 0.88
URB1O60287 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.58■□□□□ 0.88
URB1O60287 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms