Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN6O43657 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN6O43657 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.85■■□□□ 1.09
TSPAN6O43657 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.85■■□□□ 1.09
TSPAN6O43657 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.85■■□□□ 1.09
TSPAN6O43657 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.85■■□□□ 1.09
TSPAN6O43657 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN6O43657 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN6O43657 OXCT2P1-201ENST00000447263 1535 ntBASIC21.85■■□□□ 1.09
TSPAN6O43657 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN6O43657 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN6O43657 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN6O43657 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TSPAN6O43657 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN6O43657 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN6O43657 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TSPAN6O43657 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
TSPAN6O43657 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.84■■□□□ 1.09
TSPAN6O43657 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.84■■□□□ 1.09
TSPAN6O43657 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN6O43657 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN6O43657 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN6O43657 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.83■■□□□ 1.09
TSPAN6O43657 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TSPAN6O43657 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TSPAN6O43657 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.83■■□□□ 1.09
TSPAN6O43657 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TSPAN6O43657 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.83■■□□□ 1.09
TSPAN6O43657 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN6O43657 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN6O43657 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
TSPAN6O43657 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TSPAN6O43657 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.82■■□□□ 1.08
TSPAN6O43657 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.82■■□□□ 1.08
TSPAN6O43657 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L2-201ENST00000561772 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L6-201ENST00000626483 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L1-201ENST00000627662 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L8-201ENST00000629013 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L3-201ENST00000630187 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L7-201ENST00000630678 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 DUX4L5-201ENST00000630834 1275 ntBASIC21.82■■□□□ 1.08
TSPAN6O43657 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TSPAN6O43657 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.82■■□□□ 1.08
TSPAN6O43657 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN6O43657 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN6O43657 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN6O43657 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN6O43657 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN6O43657 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.81■■□□□ 1.08
TSPAN6O43657 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN6O43657 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN6O43657 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.81■■□□□ 1.08
TSPAN6O43657 CCDC92B-201ENST00000575506 885 ntBASIC21.81■■□□□ 1.08
TSPAN6O43657 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.81■■□□□ 1.08
TSPAN6O43657 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN6O43657 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN6O43657 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.8■■□□□ 1.08
TSPAN6O43657 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TSPAN6O43657 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN6O43657 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.8■■□□□ 1.08
TSPAN6O43657 TERF1P2-201ENST00000583350 1212 ntBASIC21.8■■□□□ 1.08
TSPAN6O43657 SMUG1P1-201ENST00000590640 811 ntBASIC21.8■■□□□ 1.08
TSPAN6O43657 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.8■■□□□ 1.08
TSPAN6O43657 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
TSPAN6O43657 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN6O43657 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN6O43657 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN6O43657 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TSPAN6O43657 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN6O43657 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN6O43657 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TSPAN6O43657 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TSPAN6O43657 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
TSPAN6O43657 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.79■■□□□ 1.08
TSPAN6O43657 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TSPAN6O43657 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TSPAN6O43657 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN6O43657 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN6O43657 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TSPAN6O43657 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN6O43657 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN6O43657 BX005040.4-201ENST00000637145 1518 ntBASIC21.79■■□□□ 1.08
TSPAN6O43657 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN6O43657 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN6O43657 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TSPAN6O43657 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 C9orf163-202ENST00000624034 2573 ntBASIC21.78■■□□□ 1.08
TSPAN6O43657 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.78■■□□□ 1.08
TSPAN6O43657 KRT18P14-201ENST00000534205 1250 ntBASIC21.78■■□□□ 1.08
TSPAN6O43657 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.78■■□□□ 1.08
TSPAN6O43657 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TSPAN6O43657 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms