Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 AL354811.1-201ENST00000610286 706 ntBASIC24.05■■□□□ 1.44
NCK2O43639 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.05■■□□□ 1.44
NCK2O43639 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.05■■□□□ 1.44
NCK2O43639 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.05■■□□□ 1.44
NCK2O43639 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.05■■□□□ 1.44
NCK2O43639 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
NCK2O43639 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCK2O43639 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.04■■□□□ 1.44
NCK2O43639 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCK2O43639 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.04■■□□□ 1.44
NCK2O43639 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCK2O43639 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCK2O43639 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.04■■□□□ 1.44
NCK2O43639 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.04■■□□□ 1.44
NCK2O43639 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.04■■□□□ 1.44
NCK2O43639 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
NCK2O43639 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCK2O43639 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCK2O43639 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NCK2O43639 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.04■■□□□ 1.44
NCK2O43639 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.04■■□□□ 1.44
NCK2O43639 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
NCK2O43639 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.03■■□□□ 1.44
NCK2O43639 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 MIR572-201ENST00000384983 95 ntBASIC24.03■■□□□ 1.44
NCK2O43639 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.03■■□□□ 1.44
NCK2O43639 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.03■■□□□ 1.44
NCK2O43639 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.03■■□□□ 1.44
NCK2O43639 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NCK2O43639 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.02■■□□□ 1.44
NCK2O43639 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NCK2O43639 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCK2O43639 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NCK2O43639 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NCK2O43639 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.01■■□□□ 1.43
NCK2O43639 NTF6G-201ENST00000591094 616 ntBASIC24.01■■□□□ 1.43
NCK2O43639 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.01■■□□□ 1.43
NCK2O43639 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NCK2O43639 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NCK2O43639 AL161729.1-201ENST00000604104 1402 ntBASIC24.01■■□□□ 1.43
NCK2O43639 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NCK2O43639 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24■■□□□ 1.43
NCK2O43639 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
NCK2O43639 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24■■□□□ 1.43
NCK2O43639 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NCK2O43639 IGHV3-19-201ENST00000521488 291 ntBASIC24■■□□□ 1.43
NCK2O43639 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24■■□□□ 1.43
NCK2O43639 pRNA.6-201ENST00000610482 90 ntBASIC24■■□□□ 1.43
NCK2O43639 pRNA.5-201ENST00000612139 90 ntBASIC24■■□□□ 1.43
NCK2O43639 pRNA.11-201ENST00000618423 90 ntBASIC24■■□□□ 1.43
NCK2O43639 pRNA.13-201ENST00000619112 90 ntBASIC24■■□□□ 1.43
NCK2O43639 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24■■□□□ 1.43
NCK2O43639 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NCK2O43639 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24■■□□□ 1.43
NCK2O43639 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.99■■□□□ 1.43
NCK2O43639 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.99■■□□□ 1.43
NCK2O43639 AC012414.1-201ENST00000556676 535 ntBASIC23.99■■□□□ 1.43
NCK2O43639 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
NCK2O43639 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.99■■□□□ 1.43
NCK2O43639 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCK2O43639 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 GUSBP5-202ENST00000510805 1989 ntBASIC23.98■■□□□ 1.43
NCK2O43639 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
NCK2O43639 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.98■■□□□ 1.43
NCK2O43639 CCDC92B-201ENST00000575506 885 ntBASIC23.98■■□□□ 1.43
NCK2O43639 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms