Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH17O14917 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH17O14917 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH17O14917 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH17O14917 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PCDH17O14917 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH17O14917 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH17O14917 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDH17O14917 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH17O14917 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.79■□□□□ 0.92
PCDH17O14917 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH17O14917 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH17O14917 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH17O14917 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH17O14917 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH17O14917 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDH17O14917 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH17O14917 LINC00526-201ENST00000581067 1875 ntBASIC20.78■□□□□ 0.92
PCDH17O14917 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH17O14917 IRS3P-201ENST00000223076 1006 ntBASIC20.78■□□□□ 0.92
PCDH17O14917 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDH17O14917 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH17O14917 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.78■□□□□ 0.92
PCDH17O14917 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH17O14917 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDH17O14917 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH17O14917 AC126544.1-201ENST00000580842 1059 ntBASIC20.78■□□□□ 0.92
PCDH17O14917 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH17O14917 MIR5787-201ENST00000611784 55 ntBASIC20.78■□□□□ 0.92
PCDH17O14917 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH17O14917 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDH17O14917 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH17O14917 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH17O14917 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
PCDH17O14917 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH17O14917 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH17O14917 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH17O14917 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
PCDH17O14917 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH17O14917 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH17O14917 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDH17O14917 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH17O14917 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH17O14917 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH17O14917 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH17O14917 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH17O14917 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PCDH17O14917 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH17O14917 SLC47A1P1-202ENST00000449666 945 ntBASIC20.75■□□□□ 0.91
PCDH17O14917 AP005435.1-201ENST00000529293 1178 ntBASIC20.75■□□□□ 0.91
PCDH17O14917 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDH17O14917 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH17O14917 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDH17O14917 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH17O14917 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDH17O14917 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDH17O14917 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDH17O14917 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 IGHV3-19-201ENST00000521488 291 ntBASIC20.74■□□□□ 0.91
PCDH17O14917 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH17O14917 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH17O14917 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH17O14917 ECEL1P1-201ENST00000373592 1742 ntBASIC20.73■□□□□ 0.91
PCDH17O14917 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDH17O14917 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms