Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 AC004687.1-201ENST00000579003 1625 ntBASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPA3F8WFD2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 AC123595.1-201ENST00000440769 1046 ntBASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA3F8WFD2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L2-201ENST00000561772 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L6-201ENST00000626483 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L1-201ENST00000627662 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L8-201ENST00000629013 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L3-201ENST00000630187 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L7-201ENST00000630678 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 DUX4L5-201ENST00000630834 1275 ntBASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NPIPA3F8WFD2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 AC105233.4-201ENST00000642045 216 ntBASIC19.83■□□□□ 0.77
NPIPA3F8WFD2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA3F8WFD2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA3F8WFD2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 KRT18P5-201ENST00000436075 1291 ntBASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.82■□□□□ 0.76
NPIPA3F8WFD2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.81■□□□□ 0.76
NPIPA3F8WFD2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA3F8WFD2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.8■□□□□ 0.76
NPIPA3F8WFD2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.8■□□□□ 0.76
NPIPA3F8WFD2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms