Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 AC004687.1-201ENST00000579003 1625 ntBASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 AC123595.1-201ENST00000440769 1046 ntBASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA2E9PIF3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L2-201ENST00000561772 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L6-201ENST00000626483 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L1-201ENST00000627662 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L8-201ENST00000629013 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L3-201ENST00000630187 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L7-201ENST00000630678 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 DUX4L5-201ENST00000630834 1275 ntBASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA2E9PIF3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 AC105233.4-201ENST00000642045 216 ntBASIC19.83■□□□□ 0.77
NPIPA2E9PIF3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA2E9PIF3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA2E9PIF3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 KRT18P5-201ENST00000436075 1291 ntBASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.82■□□□□ 0.76
NPIPA2E9PIF3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.81■□□□□ 0.76
NPIPA2E9PIF3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms