Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 C11orf96-202ENST00000528572 1834 ntBASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF25A6NGN4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 LINC01529-204ENST00000636474 1715 ntBASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 SYT6-210ENST00000641643 1587 ntBASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 AC096631.2-201ENST00000436136 790 ntBASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF25A6NGN4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 DUX4L4-201ENST00000566884 1269 ntBASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF25A6NGN4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.87
PRAMEF25A6NGN4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
PRAMEF25A6NGN4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF25A6NGN4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 UNC93B3-201ENST00000308076 687 ntBASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF25A6NGN4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 pRNA.6-201ENST00000610482 90 ntBASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 pRNA.5-201ENST00000612139 90 ntBASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 pRNA.11-201ENST00000618423 90 ntBASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 pRNA.13-201ENST00000619112 90 ntBASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 AL137060.1-201ENST00000618151 2648 ntBASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF25A6NGN4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 AL136162.1-201ENST00000607711 1078 ntBASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 AC110285.6-201ENST00000617652 491 ntBASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF25A6NGN4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF25A6NGN4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF25A6NGN4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms