Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 MIR1224-201ENST00000408193 85 ntBASIC21.15■□□□□ 0.98
CNOT1A5YKK6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CNOT1A5YKK6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT1A5YKK6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 AC013268.1-206ENST00000638368 961 ntBASIC21.14■□□□□ 0.97
CNOT1A5YKK6 AC112229.1-201ENST00000639295 961 ntBASIC21.14■□□□□ 0.97
CNOT1A5YKK6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 ECEL1P3-201ENST00000427961 737 ntBASIC21.14■□□□□ 0.97
CNOT1A5YKK6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CNOT1A5YKK6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 HLA-L-211ENST00000482052 1765 ntBASIC21.13■□□□□ 0.97
CNOT1A5YKK6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CNOT1A5YKK6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 AC142086.6-201ENST00000621154 1765 ntBASIC21.12■□□□□ 0.97
CNOT1A5YKK6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT1A5YKK6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 AC006058.3-201ENST00000606217 1069 ntBASIC21.11■□□□□ 0.97
CNOT1A5YKK6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT1A5YKK6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.1■□□□□ 0.97
CNOT1A5YKK6 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.1■□□□□ 0.97
CNOT1A5YKK6 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.1■□□□□ 0.97
CNOT1A5YKK6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNOT1A5YKK6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.1■□□□□ 0.97
CNOT1A5YKK6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.1■□□□□ 0.97
CNOT1A5YKK6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT1A5YKK6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.08■□□□□ 0.97
CNOT1A5YKK6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms