Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV3S1A0A5B6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TCRBV3S1A0A5B6 FP325331.1-202ENST00000623531 1380 ntBASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 PKD1P6-201ENST00000343738 4769 ntBASIC20.46■□□□□ 0.87
TCRBV3S1A0A5B6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 RNF126P1-201ENST00000567452 1320 ntBASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV3S1A0A5B6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 MIR4281-201ENST00000580852 62 ntBASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV3S1A0A5B6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV3S1A0A5B6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 AC009086.3-201ENST00000623486 1008 ntBASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV3S1A0A5B6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 THA1P-201ENST00000590384 1145 ntBASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms