Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-4A0A0B4J246 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 AL137060.1-201ENST00000618151 2648 ntBASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-4A0A0B4J246 LINC00526-201ENST00000581067 1875 ntBASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-4A0A0B4J246 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 AC092028.1-203ENST00000608262 953 ntBASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms