Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 MIR6724-1-201ENST00000616420 92 ntBASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 MIR6724-2-201ENST00000616483 92 ntBASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 MIR6724-4-201ENST00000617390 92 ntBASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 MIR6724-3-201ENST00000622482 92 ntBASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV8-2A0A0B4J237 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-2A0A0B4J237 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-2A0A0B4J237 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-2A0A0B4J237 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 AL499627.2-201ENST00000606283 725 ntBASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-2A0A0B4J237 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV8-2A0A0B4J237 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-2A0A0B4J237 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-2A0A0B4J237 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV8-2A0A0B4J237 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-2A0A0B4J237 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 AL117332.1-201ENST00000622628 974 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms