Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 NCF1B-203ENST00000435988 1254 ntBASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC187A0A096LP49 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 MIR663A-201ENST00000385250 93 ntBASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC187A0A096LP49 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC187A0A096LP49 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 AL353803.4-201ENST00000565882 1934 ntBASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC187A0A096LP49 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 GPX1P1-201ENST00000388829 606 ntBASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC187A0A096LP49 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC187A0A096LP49 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 LINC00543-201ENST00000567234 1845 ntBASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.77■□□□□ 0.92
CCDC187A0A096LP49 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC187A0A096LP49 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC187A0A096LP49 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC187A0A096LP49 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 ABHD17AP1-201ENST00000358206 933 ntBASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC187A0A096LP49 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 MFSD11-216ENST00000590393 1141 ntBASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 KRT87P-202ENST00000534226 1464 ntBASIC20.75■□□□□ 0.91
CCDC187A0A096LP49 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 AC005224.4-201ENST00000583262 1652 ntBASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 AC009237.3-201ENST00000393279 1427 ntBASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC187A0A096LP49 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms