Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 FKBP4P1-201ENST00000507284 1347 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 KRT18P39-201ENST00000415349 1299 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC006328.1-201ENST00000437571 379 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 RPL21P135-201ENST00000442539 791 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 SRP9P1-201ENST00000445874 261 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 RN7SL16P-201ENST00000476316 269 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AL450346.2-201ENST00000495602 1024 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC104759.1-201ENST00000559109 939 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 AL031768.1-201ENST00000606542 701 ntBASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPA3F8WFD2 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 HERC2P9-206ENST00000529624 5187 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 CD9-212ENST00000610354 1315 ntTSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 AL591499.1-201ENST00000307155 1153 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 OR7E12P-201ENST00000344740 973 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 FAM197Y6-201ENST00000420524 766 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 HNRNPA1P25-201ENST00000422644 937 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 RPL7AP53-201ENST00000468834 793 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 FAM86JP-202ENST00000484500 988 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 RN7SL47P-201ENST00000488710 299 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 OR52V1P-201ENST00000515557 898 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 AC006273.1-201ENST00000606966 861 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 AL117379.1-201ENST00000619319 677 ntBASIC11.64□□□□□ -0.55
NPIPA3F8WFD2 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms