Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC12.12□□□□□ -0.47
SCN2BO60939 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
SCN2BO60939 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SCN2BO60939 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC12.12□□□□□ -0.47
SCN2BO60939 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC12.12□□□□□ -0.47
SCN2BO60939 TNFAIP3-209ENST00000619035 2267 ntTSL 5 BASIC12.12□□□□□ -0.47
SCN2BO60939 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 LRRC37A7P-201ENST00000583900 2759 ntBASIC12.12□□□□□ -0.47
SCN2BO60939 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC12.12□□□□□ -0.47
SCN2BO60939 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.12□□□□□ -0.47
SCN2BO60939 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCN2BO60939 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SCN2BO60939 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 FMO6P-202ENST00000367754 2130 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC12.11□□□□□ -0.47
SCN2BO60939 WDR25-206ENST00000554998 1952 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 HSD3BP1-201ENST00000286193 1111 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 AC005822.1-201ENST00000414124 1034 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 TEDDM2P-201ENST00000414169 786 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 HINT2P1-201ENST00000419438 481 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC12.11□□□□□ -0.47
SCN2BO60939 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.11□□□□□ -0.47
SCN2BO60939 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.11□□□□□ -0.47
SCN2BO60939 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC12.11□□□□□ -0.47
SCN2BO60939 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC12.11□□□□□ -0.47
SCN2BO60939 RPS19P3-201ENST00000480487 441 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.11□□□□□ -0.47
SCN2BO60939 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.11□□□□□ -0.47
SCN2BO60939 AC141586.1-203ENST00000567242 366 ntBASIC12.11□□□□□ -0.47
SCN2BO60939 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.11□□□□□ -0.47
SCN2BO60939 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
SCN2BO60939 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SCN2BO60939 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SCN2BO60939 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC12.11□□□□□ -0.47
SCN2BO60939 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC12.11□□□□□ -0.47
SCN2BO60939 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 BTN2A2-206ENST00000469230 1790 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SCN2BO60939 GLDN-210ENST00000612989 1676 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCN2BO60939 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms