Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AL021155.1-201ENST00000438808 2637 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 PRADC1P1-201ENST00000412317 525 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CRIP1P2-201ENST00000425396 228 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AP000346.2-202ENST00000425948 383 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 BRI3P1-201ENST00000440440 378 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CDK2AP2P2-201ENST00000478512 367 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 RN7SL638P-201ENST00000494527 290 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 RN7SL678P-201ENST00000579533 299 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AL589743.3-201ENST00000604121 517 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AL353622.2-201ENST00000605846 425 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 RN7SL341P-201ENST00000613745 298 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NPIPA3F8WFD2 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AL161727.1-201ENST00000457409 530 ntBASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC131274.3-201ENST00000578745 1271 ntBASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
NPIPA3F8WFD2 AC009812.1-201ENST00000605948 1059 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms