Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 TNFAIP3-209ENST00000619035 2267 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC1A1P43005 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 AC134682.1-201ENST00000569285 3377 ntBASIC13.42□□□□□ -0.26
SLC1A1P43005 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SLC1A1P43005 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 AC092139.4-201ENST00000624318 2794 ntBASIC13.42□□□□□ -0.26
SLC1A1P43005 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SLC1A1P43005 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SLC1A1P43005 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC1A1P43005 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC1A1P43005 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC1A1P43005 RPL3P5-201ENST00000441645 1232 ntBASIC13.42□□□□□ -0.26
SLC1A1P43005 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 RN7SL8P-201ENST00000461771 266 ntBASIC13.42□□□□□ -0.26
SLC1A1P43005 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC1A1P43005 AC018635.2-201ENST00000608625 364 ntBASIC13.42□□□□□ -0.26
SLC1A1P43005 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC1A1P43005 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SLC1A1P43005 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SLC1A1P43005 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 AL590434.1-201ENST00000641402 1886 ntBASIC13.42□□□□□ -0.26
SLC1A1P43005 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC1A1P43005 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SLC1A1P43005 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 DBIL5P-203ENST00000536214 2677 ntBASIC13.41□□□□□ -0.26
SLC1A1P43005 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.41□□□□□ -0.26
SLC1A1P43005 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 HSD3BP1-201ENST00000286193 1111 ntBASIC13.41□□□□□ -0.26
SLC1A1P43005 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SLC1A1P43005 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SLC1A1P43005 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.41□□□□□ -0.26
SLC1A1P43005 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 AC022494.1-201ENST00000466044 728 ntBASIC13.41□□□□□ -0.26
SLC1A1P43005 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 ALG1L3P-201ENST00000503331 765 ntBASIC13.41□□□□□ -0.26
SLC1A1P43005 BCL2L12P1-201ENST00000508390 733 ntBASIC13.41□□□□□ -0.26
SLC1A1P43005 RNA5SP423-201ENST00000517127 109 ntBASIC13.41□□□□□ -0.26
SLC1A1P43005 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 AC011471.3-201ENST00000623576 402 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms