Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AL512306.1-201ENST00000432698 848 ntBASIC10.46□□□□□ -0.73
RAB40CQ96S21 ERP29P1-201ENST00000442902 706 ntBASIC10.46□□□□□ -0.73
RAB40CQ96S21 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AK2-208ENST00000487289 920 ntTSL 2 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 RPSAP67-201ENST00000584105 862 ntBASIC10.46□□□□□ -0.73
RAB40CQ96S21 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.46□□□□□ -0.73
RAB40CQ96S21 AC023509.4-201ENST00000602306 775 ntBASIC10.46□□□□□ -0.73
RAB40CQ96S21 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RAB40CQ96S21 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 FAM183BP-201ENST00000409072 1595 ntBASIC10.46□□□□□ -0.74
RAB40CQ96S21 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
RAB40CQ96S21 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.46□□□□□ -0.74
RAB40CQ96S21 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 NMUR2-201ENST00000255262 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AL121753.2-201ENST00000624581 1461 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 MIR557-201ENST00000385239 98 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AL583805.1-201ENST00000391389 531 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AL807761.2-201ENST00000422849 729 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AP000358.1-201ENST00000456260 156 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 FTH1P22-201ENST00000456305 520 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AC024681.1-201ENST00000521917 487 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AC138701.2-201ENST00000553634 226 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 ACTG1P17-201ENST00000558391 1119 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 AP001505.2-201ENST00000616815 443 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 AC009560.1-201ENST00000620208 434 ntBASIC10.45□□□□□ -0.74
RAB40CQ96S21 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms