Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AQP7P1-201ENST00000412626 1045 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AL139008.1-201ENST00000437894 228 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 BRI3P1-201ENST00000440440 378 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AC010997.1-201ENST00000447646 350 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 RN7SL523P-201ENST00000484401 298 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AC099328.1-201ENST00000498809 1030 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AL139339.2-201ENST00000608063 657 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AC087893.1-201ENST00000612818 664 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AC099795.2-201ENST00000639582 440 ntBASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.9□□□□□ -0.51
PRICKLE4Q2TBC4 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AL807752.1-201ENST00000395082 1322 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 DNM1P46-202ENST00000415963 882 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AC000077.1-201ENST00000420012 953 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 HLA-DRB9-201ENST00000449413 343 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AC113398.1-201ENST00000464124 406 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 RN7SL524P-201ENST00000581152 300 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AP000897.1-201ENST00000584036 1613 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 AC005682.1-201ENST00000452069 1467 ntBASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PRICKLE4Q2TBC4 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC11.88□□□□□ -0.51
PRICKLE4Q2TBC4 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PRICKLE4Q2TBC4 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PRICKLE4Q2TBC4 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms