Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 METTL23-211ENST00000589977 617 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC138627.1-201ENST00000641127 1257 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AIFM1P1-201ENST00000413342 1841 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 PABPC1P2-201ENST00000471997 1805 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 DDX11L2-201ENST00000437401 1398 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 HRC-203ENST00000595625 2044 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RPS15P5-201ENST00000449885 432 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 HNRNPA1P42-201ENST00000458678 957 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AC067942.1-202ENST00000471756 1057 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 GOLGA2P10-201ENST00000550961 817 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 MIR4763-201ENST00000581461 92 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL109954.3-201ENST00000615088 558 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AL008638.4-201ENST00000624792 1315 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 AC091181.1-201ENST00000623762 2098 ntBASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPA3F8WFD2 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms