Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 AL031719.1-201ENST00000623365 2587 ntBASIC13.46□□□□□ -0.25
MTHFRP42898 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MTHFRP42898 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MTHFRP42898 FAM45BP-201ENST00000408950 1074 ntBASIC13.46□□□□□ -0.25
MTHFRP42898 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 AC005011.1-201ENST00000455206 210 ntBASIC13.46□□□□□ -0.25
MTHFRP42898 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 PARVG-208ENST00000466375 820 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 RN7SL483P-201ENST00000478417 285 ntBASIC13.46□□□□□ -0.25
MTHFRP42898 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 AC090616.6-202ENST00000583601 1088 ntBASIC13.46□□□□□ -0.25
MTHFRP42898 PSME3-213ENST00000592169 826 ntTSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC13.46□□□□□ -0.25
MTHFRP42898 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC13.46□□□□□ -0.25
MTHFRP42898 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC13.46□□□□□ -0.25
MTHFRP42898 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.46□□□□□ -0.25
MTHFRP42898 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
MTHFRP42898 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MTHFRP42898 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.46□□□□□ -0.26
MTHFRP42898 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.46□□□□□ -0.26
MTHFRP42898 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MTHFRP42898 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 AC015959.1-201ENST00000623263 1377 ntBASIC13.45□□□□□ -0.26
MTHFRP42898 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.45□□□□□ -0.26
MTHFRP42898 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 AC108024.1-201ENST00000626286 1721 ntBASIC13.45□□□□□ -0.26
MTHFRP42898 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
MTHFRP42898 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MTHFRP42898 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.45□□□□□ -0.26
MTHFRP42898 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC13.45□□□□□ -0.26
MTHFRP42898 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC13.45□□□□□ -0.26
MTHFRP42898 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC13.45□□□□□ -0.26
MTHFRP42898 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC13.45□□□□□ -0.26
MTHFRP42898 CYP4F60P-201ENST00000439449 549 ntBASIC13.45□□□□□ -0.26
MTHFRP42898 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC13.45□□□□□ -0.26
MTHFRP42898 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC13.45□□□□□ -0.26
MTHFRP42898 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC13.45□□□□□ -0.26
MTHFRP42898 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC13.45□□□□□ -0.26
MTHFRP42898 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC13.45□□□□□ -0.26
MTHFRP42898 AC015936.1-201ENST00000591013 1028 ntBASIC13.45□□□□□ -0.26
MTHFRP42898 AC092327.1-201ENST00000596612 744 ntBASIC13.45□□□□□ -0.26
MTHFRP42898 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MTHFRP42898 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MTHFRP42898 AC010503.4-201ENST00000615487 688 ntBASIC13.45□□□□□ -0.26
MTHFRP42898 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC13.45□□□□□ -0.26
MTHFRP42898 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MTHFRP42898 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms