Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC12.24□□□□□ -0.45
SCN2BO60939 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 RN7SL181P-201ENST00000462921 277 ntBASIC12.24□□□□□ -0.45
SCN2BO60939 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SCN2BO60939 AC008026.2-201ENST00000495438 348 ntBASIC12.24□□□□□ -0.45
SCN2BO60939 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.24□□□□□ -0.45
SCN2BO60939 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 AC104440.1-201ENST00000605010 343 ntBASIC12.24□□□□□ -0.45
SCN2BO60939 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 AC113385.2-201ENST00000614465 762 ntBASIC12.24□□□□□ -0.45
SCN2BO60939 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.24□□□□□ -0.45
SCN2BO60939 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 FP325332.1-201ENST00000624818 2045 ntBASIC12.23□□□□□ -0.45
SCN2BO60939 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SCN2BO60939 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 AC092139.4-201ENST00000624318 2794 ntBASIC12.23□□□□□ -0.45
SCN2BO60939 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 AC004837.1-201ENST00000446267 564 ntBASIC12.23□□□□□ -0.45
SCN2BO60939 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 AC087203.1-201ENST00000532111 1181 ntBASIC12.23□□□□□ -0.45
SCN2BO60939 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.23□□□□□ -0.45
SCN2BO60939 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.23□□□□□ -0.45
SCN2BO60939 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 AC122688.3-201ENST00000623804 3467 ntBASIC12.23□□□□□ -0.45
SCN2BO60939 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
SCN2BO60939 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.23□□□□□ -0.45
SCN2BO60939 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SCN2BO60939 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 AC126323.1-203ENST00000562306 2579 ntBASIC12.23□□□□□ -0.45
SCN2BO60939 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SCN2BO60939 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 AC134682.1-201ENST00000569285 3377 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms