Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 SUDS3P1-201ENST00000505831 966 ntBASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 AP001330.3-201ENST00000520123 633 ntBASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 AC027682.1-201ENST00000562846 899 ntBASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 AF213884.3-201ENST00000563833 479 ntBASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 AC233992.3-201ENST00000607491 485 ntBASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 AL031432.3-201ENST00000607698 485 ntBASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA3PQ9Y6N3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 OR2I1P-207ENST00000453522 948 ntBASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLCA3PQ9Y6N3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 AC091305.1-201ENST00000479476 895 ntBASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 AL136967.2-201ENST00000623968 743 ntBASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA3PQ9Y6N3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 AC099791.1-201ENST00000416440 715 ntBASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA3PQ9Y6N3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLCA3PQ9Y6N3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CLCA3PQ9Y6N3 RASA4CP-201ENST00000424092 1398 ntBASIC20.58■□□□□ 0.88
CLCA3PQ9Y6N3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 AC126544.1-201ENST00000580842 1059 ntBASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA3PQ9Y6N3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 AC019069.1-201ENST00000610008 1333 ntBASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 AC010525.1-201ENST00000585559 441 ntBASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms