Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 KRT18P11-201ENST00000435214 1283 ntBASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.74■■□□□ 1.71
SNCAIPQ9Y6H5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 AC079140.4-201ENST00000507448 529 ntBASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 AC087239.1-201ENST00000622671 572 ntBASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.73■■□□□ 1.71
SNCAIPQ9Y6H5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNCAIPQ9Y6H5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.72■■□□□ 1.71
SNCAIPQ9Y6H5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
SNCAIPQ9Y6H5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNCAIPQ9Y6H5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.72■■□□□ 1.71
SNCAIPQ9Y6H5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNCAIPQ9Y6H5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 MFSD11-216ENST00000590393 1141 ntBASIC25.71■■□□□ 1.71
SNCAIPQ9Y6H5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SNCAIPQ9Y6H5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SNCAIPQ9Y6H5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 GPX1P1-201ENST00000388829 606 ntBASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
SNCAIPQ9Y6H5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 OXCT2P1-201ENST00000447263 1535 ntBASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SNCAIPQ9Y6H5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 AL050303.2-201ENST00000619798 666 ntBASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 AL353803.4-201ENST00000565882 1934 ntBASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNCAIPQ9Y6H5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.67■■□□□ 1.7
SNCAIPQ9Y6H5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.67■■□□□ 1.7
SNCAIPQ9Y6H5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.67■■□□□ 1.7
SNCAIPQ9Y6H5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SNCAIPQ9Y6H5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SNCAIPQ9Y6H5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 AC142086.2-201ENST00000569753 217 ntBASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNCAIPQ9Y6H5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SNCAIPQ9Y6H5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms