Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.04■■□□□ 1.6
PTCH2Q9Y6C5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.04■■□□□ 1.6
PTCH2Q9Y6C5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.04■■□□□ 1.6
PTCH2Q9Y6C5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.03■■□□□ 1.6
PTCH2Q9Y6C5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PTCH2Q9Y6C5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PTCH2Q9Y6C5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.03■■□□□ 1.6
PTCH2Q9Y6C5 AC144652.1-201ENST00000609974 1624 ntBASIC25.03■■□□□ 1.6
PTCH2Q9Y6C5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 AC104187.1-201ENST00000607510 612 ntBASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.02■■□□□ 1.6
PTCH2Q9Y6C5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 UBE2DNL-204ENST00000602536 740 ntBASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PTCH2Q9Y6C5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 RPS2P52-201ENST00000469610 820 ntBASIC25■■□□□ 1.59
PTCH2Q9Y6C5 AF201337.1-201ENST00000520239 748 ntBASIC25■■□□□ 1.59
PTCH2Q9Y6C5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCH2Q9Y6C5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.99■■□□□ 1.59
PTCH2Q9Y6C5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 AC105036.2-201ENST00000569468 176 ntBASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PTCH2Q9Y6C5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 RNA5SP413-201ENST00000516373 109 ntBASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PTCH2Q9Y6C5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.96■■□□□ 1.59
PTCH2Q9Y6C5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PTCH2Q9Y6C5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms