Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
PTPN22Q9Y2R2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PTPN22Q9Y2R2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.27■■□□□ 1.64
PTPN22Q9Y2R2 FP325331.1-202ENST00000623531 1380 ntBASIC25.27■■□□□ 1.64
PTPN22Q9Y2R2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTPN22Q9Y2R2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 AC005181.1-201ENST00000604782 1256 ntBASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 AC133041.1-202ENST00000642053 222 ntBASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PTPN22Q9Y2R2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 ITM2C-210ENST00000620962 501 ntBASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PTPN22Q9Y2R2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 AC007322.1-201ENST00000426983 750 ntBASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 POU5F1P3-201ENST00000428824 1078 ntBASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
PTPN22Q9Y2R2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 DUX4L16-201ENST00000555130 1264 ntBASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PTPN22Q9Y2R2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 AC073210.2-201ENST00000430369 194 ntBASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTPN22Q9Y2R2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PTPN22Q9Y2R2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PTPN22Q9Y2R2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PTPN22Q9Y2R2 AC093323.1-202ENST00000635031 2045 ntBASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 KRT18P29-201ENST00000397031 1267 ntBASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PTPN22Q9Y2R2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
PTPN22Q9Y2R2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms