Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGB4Q9UN71 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 AC005703.6-201ENST00000623265 1329 ntBASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 AC242852.2-201ENST00000615738 1807 ntBASIC21.11■□□□□ 0.97
PCDHGB4Q9UN71 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 MIR6722-201ENST00000617286 78 ntBASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB4Q9UN71 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 ESRRAP2-201ENST00000418437 1549 ntBASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 AC144652.1-201ENST00000609974 1624 ntBASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 AC021242.3-201ENST00000607598 1377 ntBASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHGB4Q9UN71 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB4Q9UN71 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PCDHGB4Q9UN71 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGB4Q9UN71 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGB4Q9UN71 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHGB4Q9UN71 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGB4Q9UN71 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHGB4Q9UN71 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 FBXW4P1-201ENST00000426721 2239 ntBASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGB4Q9UN71 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGB4Q9UN71 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB4Q9UN71 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB4Q9UN71 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGB4Q9UN71 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms