Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UBQLN1Q9UMX0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
UBQLN1Q9UMX0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UBQLN1Q9UMX0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UBQLN1Q9UMX0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UBQLN1Q9UMX0 MIR5787-201ENST00000611784 55 ntBASIC23.58■■□□□ 1.37
UBQLN1Q9UMX0 OXCT2P1-201ENST00000447263 1535 ntBASIC23.58■■□□□ 1.36
UBQLN1Q9UMX0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 YBX1P1-201ENST00000445822 960 ntBASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 LINC01960-201ENST00000563759 1884 ntBASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.57■■□□□ 1.36
UBQLN1Q9UMX0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 AC087623.3-201ENST00000607047 1098 ntBASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.56■■□□□ 1.36
UBQLN1Q9UMX0 DUSP8P5-201ENST00000422884 1815 ntBASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBQLN1Q9UMX0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 AC123595.1-201ENST00000440769 1046 ntBASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBQLN1Q9UMX0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.53■■□□□ 1.36
UBQLN1Q9UMX0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
UBQLN1Q9UMX0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
UBQLN1Q9UMX0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.35
UBQLN1Q9UMX0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
UBQLN1Q9UMX0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
UBQLN1Q9UMX0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms