Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 KRT16P3-201ENST00000439127 1283 ntBASIC19.07■□□□□ 0.64
DUX4Q9UBX2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.07■□□□□ 0.64
DUX4Q9UBX2 AC010997.5-201ENST00000609182 354 ntBASIC19.07■□□□□ 0.64
DUX4Q9UBX2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX4Q9UBX2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.06■□□□□ 0.64
DUX4Q9UBX2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 AL356441.2-201ENST00000443009 864 ntBASIC19.06■□□□□ 0.64
DUX4Q9UBX2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 AC007375.3-201ENST00000600936 2314 ntBASIC19.06■□□□□ 0.64
DUX4Q9UBX2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX4Q9UBX2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DUX4Q9UBX2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 AL161729.1-201ENST00000604104 1402 ntBASIC19.04■□□□□ 0.64
DUX4Q9UBX2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX4Q9UBX2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 ALDH1A3-203ENST00000557963 1670 ntBASIC19.03■□□□□ 0.64
DUX4Q9UBX2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DUX4Q9UBX2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DUX4Q9UBX2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms