Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.11■□□□□ 0.81
LRFN1Q9P244 AC010141.3-201ENST00000456659 717 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.11■□□□□ 0.81
LRFN1Q9P244 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L2-201ENST00000561772 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L6-201ENST00000626483 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L1-201ENST00000627662 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L8-201ENST00000629013 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L3-201ENST00000630187 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L7-201ENST00000630678 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 DUX4L5-201ENST00000630834 1275 ntBASIC20.11■□□□□ 0.81
LRFN1Q9P244 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LRFN1Q9P244 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LRFN1Q9P244 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRFN1Q9P244 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 CCDC92B-201ENST00000575506 885 ntBASIC20.1■□□□□ 0.81
LRFN1Q9P244 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRFN1Q9P244 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRFN1Q9P244 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.1■□□□□ 0.81
LRFN1Q9P244 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.09■□□□□ 0.81
LRFN1Q9P244 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRFN1Q9P244 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.08■□□□□ 0.81
LRFN1Q9P244 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.08■□□□□ 0.81
LRFN1Q9P244 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRFN1Q9P244 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRFN1Q9P244 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRFN1Q9P244 KRT18P5-201ENST00000436075 1291 ntBASIC20.08■□□□□ 0.81
LRFN1Q9P244 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRFN1Q9P244 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.08■□□□□ 0.81
LRFN1Q9P244 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRFN1Q9P244 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRFN1Q9P244 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.8
LRFN1Q9P244 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.07■□□□□ 0.8
LRFN1Q9P244 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRFN1Q9P244 KRT18P14-201ENST00000534205 1250 ntBASIC20.07■□□□□ 0.8
LRFN1Q9P244 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LRFN1Q9P244 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.07■□□□□ 0.8
LRFN1Q9P244 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRFN1Q9P244 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.07■□□□□ 0.8
LRFN1Q9P244 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRFN1Q9P244 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LRFN1Q9P244 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.06■□□□□ 0.8
LRFN1Q9P244 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRFN1Q9P244 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRFN1Q9P244 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
LRFN1Q9P244 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRFN1Q9P244 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRFN1Q9P244 TERF1P2-201ENST00000583350 1212 ntBASIC20.06■□□□□ 0.8
LRFN1Q9P244 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRFN1Q9P244 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRFN1Q9P244 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRFN1Q9P244 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRFN1Q9P244 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
LRFN1Q9P244 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.05■□□□□ 0.8
LRFN1Q9P244 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.05■□□□□ 0.8
LRFN1Q9P244 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRFN1Q9P244 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms