Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 SUDS3P1-201ENST00000505831 966 ntBASIC20.43■□□□□ 0.86
CNIH4Q9P003 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 AL031432.3-201ENST00000607698 485 ntBASIC20.43■□□□□ 0.86
CNIH4Q9P003 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNIH4Q9P003 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.42■□□□□ 0.86
CNIH4Q9P003 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNIH4Q9P003 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNIH4Q9P003 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.42■□□□□ 0.86
CNIH4Q9P003 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.42■□□□□ 0.86
CNIH4Q9P003 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNIH4Q9P003 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.42■□□□□ 0.86
CNIH4Q9P003 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNIH4Q9P003 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNIH4Q9P003 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.41■□□□□ 0.86
CNIH4Q9P003 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.41■□□□□ 0.86
CNIH4Q9P003 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNIH4Q9P003 LINC00526-201ENST00000581067 1875 ntBASIC20.41■□□□□ 0.86
CNIH4Q9P003 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNIH4Q9P003 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.41■□□□□ 0.86
CNIH4Q9P003 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CNIH4Q9P003 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNIH4Q9P003 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNIH4Q9P003 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNIH4Q9P003 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CNIH4Q9P003 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNIH4Q9P003 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.41■□□□□ 0.86
CNIH4Q9P003 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.4■□□□□ 0.86
CNIH4Q9P003 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CNIH4Q9P003 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.4■□□□□ 0.86
CNIH4Q9P003 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
CNIH4Q9P003 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNIH4Q9P003 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNIH4Q9P003 AL353803.4-201ENST00000565882 1934 ntBASIC20.39■□□□□ 0.86
CNIH4Q9P003 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNIH4Q9P003 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.39■□□□□ 0.86
CNIH4Q9P003 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CNIH4Q9P003 AC133637.1-201ENST00000624115 1537 ntBASIC20.39■□□□□ 0.85
CNIH4Q9P003 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNIH4Q9P003 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.39■□□□□ 0.85
CNIH4Q9P003 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNIH4Q9P003 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNIH4Q9P003 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.39■□□□□ 0.85
CNIH4Q9P003 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.39■□□□□ 0.85
CNIH4Q9P003 AL136967.2-201ENST00000623968 743 ntBASIC20.39■□□□□ 0.85
CNIH4Q9P003 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNIH4Q9P003 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNIH4Q9P003 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.39■□□□□ 0.85
CNIH4Q9P003 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNIH4Q9P003 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.38■□□□□ 0.85
CNIH4Q9P003 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.38■□□□□ 0.85
CNIH4Q9P003 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 MIR939-201ENST00000401314 82 ntBASIC20.38■□□□□ 0.85
CNIH4Q9P003 AC091305.1-201ENST00000479476 895 ntBASIC20.38■□□□□ 0.85
CNIH4Q9P003 AP001330.3-201ENST00000520123 633 ntBASIC20.38■□□□□ 0.85
CNIH4Q9P003 AC027682.1-201ENST00000562846 899 ntBASIC20.38■□□□□ 0.85
CNIH4Q9P003 AF213884.3-201ENST00000563833 479 ntBASIC20.38■□□□□ 0.85
CNIH4Q9P003 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.38■□□□□ 0.85
CNIH4Q9P003 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
CNIH4Q9P003 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNIH4Q9P003 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.38■□□□□ 0.85
CNIH4Q9P003 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 ECEL1P1-201ENST00000373592 1742 ntBASIC20.37■□□□□ 0.85
CNIH4Q9P003 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CNIH4Q9P003 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CNIH4Q9P003 BX842568.3-201ENST00000418104 571 ntBASIC20.37■□□□□ 0.85
CNIH4Q9P003 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.37■□□□□ 0.85
CNIH4Q9P003 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.37■□□□□ 0.85
CNIH4Q9P003 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms