Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 C1orf229-201ENST00000623686 2258 ntBASIC20.92■□□□□ 0.94
NECTIN3Q9NQS3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 AC092068.2-201ENST00000590491 1708 ntBASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.91■□□□□ 0.94
NECTIN3Q9NQS3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 MIR638-201ENST00000385237 100 ntBASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 AL138724.1-201ENST00000606771 1088 ntBASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NECTIN3Q9NQS3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NECTIN3Q9NQS3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
NECTIN3Q9NQS3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.89■□□□□ 0.94
NECTIN3Q9NQS3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NECTIN3Q9NQS3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN3Q9NQS3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 AL499627.2-201ENST00000606283 725 ntBASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 AC011298.3-201ENST00000615796 283 ntBASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.88■□□□□ 0.93
NECTIN3Q9NQS3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 MIR4767-201ENST00000582827 78 ntBASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
NECTIN3Q9NQS3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NECTIN3Q9NQS3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 AC133561.4-201ENST00000566112 224 ntBASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 AC136469.2-201ENST00000623944 1028 ntBASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms